Gene Dred_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2236 
Symbol 
ID4957754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2445422 
End bp2446126 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content39% 
IMG OID640181410 
ProductABC transporter related 
Protein accessionYP_001113574 
Protein GI134300078 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0732075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAG TTGAAGATGT ACACGTATAT TACGGTGCAA TACATGCCAT TAAGGGTATT 
TCCCTGGAGG TACCTCAAGG TCAAATCGTT ACACTTATAG GTGCTAATGG AGCAGGAAAA
ACATCTACCC TTAATACAAT TTGCGGCTTT ATAAAACCTA AAACAGGAAA AATTTTTTTT
GAAGGCAAAG ATATTACCAA CCTAGCTACT CAAGATATAG TTAAGCAAGG TTTAACTCAG
GTTCCCGAGG GACGTAGAAT CTTTGCCAAC ATGCCAATCT ATGAAAACTT AGAACTGGGA
GCCTATCTTA ATAGAAACAA AAAAGAAGTA GCCCAAAGAA TGGAGAAGGT TTATGCAAAA
TTCCCCAGAC TGCTGGAAAG AAAAAATCAG TTAGCTGGAA GTTTATCTGG TGGTGAACAA
CAAATGTTGG CCATGGGACG GGCACTCATG TCTAATCCGC GCTTACTACT ATTGGACGAG
CCATCCATGG GTCTTTCGCC AATCCTAGTA AAAGAAATTT TTTCCATCAT TAAAGAACTT
AATGAACAAG GAACAACAAT TTTACTAGTA GAACAAAATG CCAAGATGGC GTTATCTATA
GCCCATAAAG GCTATGTAGT TGAAACTGGT AGGATTGTAC TTGCTGGTGA GGCTAAAGAA
CTGCTTGAAT CACCGGAAGT TAAAAAAGCA TATCTTGGTG GGTAG
 
Protein sequence
MLKVEDVHVY YGAIHAIKGI SLEVPQGQIV TLIGANGAGK TSTLNTICGF IKPKTGKIFF 
EGKDITNLAT QDIVKQGLTQ VPEGRRIFAN MPIYENLELG AYLNRNKKEV AQRMEKVYAK
FPRLLERKNQ LAGSLSGGEQ QMLAMGRALM SNPRLLLLDE PSMGLSPILV KEIFSIIKEL
NEQGTTILLV EQNAKMALSI AHKGYVVETG RIVLAGEAKE LLESPEVKKA YLGG