| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2234 |
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| Symbol | |
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| ID | 4957659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2443201 |
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| End bp | 2443968 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640181408 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001113572 |
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| Protein GI | 134300076 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.378867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTTTG AGTGGATAGT AAAAATTATT TCAGACTACG GTCCAATGTT CATTCGTGGT
GCTGGTGTGA CACTCTTAAT TTCTATCATT GGTACTATTG TGGGTTTTAT CATCGGTTTA
TTAGTAGGAA TTATACGTAC TATTCCAATG CCTGAACGCG GTGGCAAAAG AGTCACTATT
AAAATTATTA ATGCAATCTT ATCTGCTTAT ATAGAATTCT TCCGTGGCAC ACCAATGATT
GTACAAGCCA TGGTAATTTA TTATGGTTCC GCTTTAGCAT TTGGCGTGGA TATGAATCGG
TTAGTTGCAG CAATCTTTAT CGTATCTATT AATACAGGGG CGTACATGTC AGAAATTGTT
CGTGGTGGTA TTATTTCTAT CGATAAAGGA CAATTTGAAG CAGCTCATGC AATAGGTATG
AATCACGTTC AAACGATGTT TAATGTTATA ATACCACAAG TAATTCGTAA TATTTTACCA
GCAACAGGCA ATGAATTTAT TATCAATATC AAAGATACCT CTGTACTTAA CGTAATATCT
GTAACGGAAT TATTTTTCCA AACAAAATCA GTTGCAGGAA ACAACTTCAG GTATTTTGAA
TCATTCTTTG TTGCCTGTAT TATTTATTTT ATCATGACCT ATACAGTAAC AAGAATTTTA
CGTTATTTTG AAAGGAAATT AGATGGTCCA GATGATTACA TTTTGTGTGG TAATCAAATG
CAATTAGAAA GACCTGAAGA TATGCTGCGT AAGACAAAAA ATAATTAG
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| Protein sequence | MTFEWIVKII SDYGPMFIRG AGVTLLISII GTIVGFIIGL LVGIIRTIPM PERGGKRVTI
KIINAILSAY IEFFRGTPMI VQAMVIYYGS ALAFGVDMNR LVAAIFIVSI NTGAYMSEIV
RGGIISIDKG QFEAAHAIGM NHVQTMFNVI IPQVIRNILP ATGNEFIINI KDTSVLNVIS
VTELFFQTKS VAGNNFRYFE SFFVACIIYF IMTYTVTRIL RYFERKLDGP DDYILCGNQM
QLERPEDMLR KTKNN
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