Gene Dred_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2228 
Symbol 
ID4957194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2435032 
End bp2435850 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content31% 
IMG OID640181402 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001113566 
Protein GI134300070 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0174624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAATAAATAC AATGTATTTT AGCCCCACAG GCACAACAAA AAAAGTAGTA 
TCTGGAATAG CAAAGAAGAT TTTAGAGAAC ATTGCCAGTG AACTAACTAT AAACAATATT
GATTTTACAT TACCTGGAGT TAGAAAAGAA CCAGTATCTT TTACAGGAGA AGATGTTGTC
ATTATAGGAG TTCCTGTATA TGCAGGAAGA GTTCCTAATA TATTACTTAA TTATTTAAAT
ACTATTACTG GTAACGGTGC ACTAGCAATT GCTGTAGTTG TTTATGGAAA CAGAAATTAT
GACGATGCTC TAATTGAATT AAAGGATATT CTAGAATTAA ATGGTTTTAA AGTCATTGCT
GGGGGTGCCT TTATAGGAGA ACACTCATTT TCTAAAACTC TTGCTAAAAA CAGACCTGAT
GAAAAAGATA TGGTCATAGT AAGCGATTTT GCCGAGCAGA TATATACGAA AATAACCACT
CAAGATAATA TACAGACTGT AGTTGTAAAA GGAAATAAAC CTTATAGAAA ATATTATAAG
CCCGAAAATG AAAATGGTAC ACCTGTTGAC ATTAGAAAGG TTACTCCAAA AACAAATAGT
AATTGTATTG ATTGTAAACT TTGTGTTAAT CTCTGTCCAA TGGGTTCCAT TGATTATGAA
GATGTATCTA AATTAAACGG AATTTGTATT AAATGTGGTG CTTGTATTAA AAATTGTCCA
ACTGAAGCAA AGTATTATGA TGATAAAGAT TATTTAAGAC ATAAGCATGA ATTAGAAGTT
GATTTTGCTA GCCGAAGAGA ACCAGAAACT TTTTTCTAG
 
Protein sequence
MNKKINTMYF SPTGTTKKVV SGIAKKILEN IASELTINNI DFTLPGVRKE PVSFTGEDVV 
IIGVPVYAGR VPNILLNYLN TITGNGALAI AVVVYGNRNY DDALIELKDI LELNGFKVIA
GGAFIGEHSF SKTLAKNRPD EKDMVIVSDF AEQIYTKITT QDNIQTVVVK GNKPYRKYYK
PENENGTPVD IRKVTPKTNS NCIDCKLCVN LCPMGSIDYE DVSKLNGICI KCGACIKNCP
TEAKYYDDKD YLRHKHELEV DFASRREPET FF