| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2197 |
|---|
| Symbol | |
|---|
| ID | 4958394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2402225 |
|---|
| End bp | 2403670 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640181373 |
|---|
| Product | UbiD family decarboxylase |
|---|
| Protein accession | YP_001113537 |
|---|
| Protein GI | 134300041 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCATATC AAGATCTAAG GGATTACATG AAGACCCTGG AAAATAAGGG GTTATTGAAA
CGGATTACGA CTGAGGTAAG TGCTGATCTA GAGATTACAG AAATAACGGA CCGGGTTTGT
AAAAGCAGTG GCCCTGCACT GTTGTTTGAA AATGTTAAAG GTTATAAAAT GCCTGTGATT
ACCAACATGA TGGGTTCAAT GGAAATGATA AAGTTGGCCC TGCAGGTAGA TGACCTAGAT
GATATCGGTA AAGAAATCAT GACCTTTTTA AATCCCCCGG AGCTTCCCTC AAGTTTTCTG
GATAAGTTAA AAACACTGCC AAAGTTGGCG CAAATTTCTT CCTTTTTGCC CAAGAATGTC
CGTAGCGGTC CTTGTAAAGA GGTTATTATC AAGGACAAAC CGTCTTTAGC CGTACTACCG
GTCTTAAAAT GCTGGCCTAT GGATGGAGGC CCCTTTATTA CTCTGCCGCT GGTTTTTACC
AAGGACCCGG AAACAGGCAG GAGAAATGTC GGTATGTACC GCATGCAGGT CTTTGATGAA
ACCACCACAG GTATGCACTG GCACAAGCAT AAAGATGGGG CTGAAAACCA TCGAAAACAG
AAACAGAAGA AACAACGACT GGAAGTGGCA GTGGCCTTGG GGGCTGACCC AGCCTGCATT
TTTTCGTCCA TTGCTCCATT GCCCCCGGCC ATTGATGAAA TGTTGTTGGC AGGATTTCTA
CGTAAAGAAC CGGTGGAAAT GGTAAAGTGC GAGACTGTGG ATATTGAGGT TCCTGCCCGG
GCAGAAATTA TTTTGGAGGG CTATGTGGAC CCCGATGAAA CCCGCTGGGA AGGCCCCTTT
GGGGATCATA CTGGATACTA CTCCTTAGCA GATGATTACC CAGTATTTCA TCTAACCTGT
ATTACGCACC GGAAAGACCC TATTTACCCA GCCACCATCG TGGGGCAACC TCCCATTGAA
GATAATTTTA TTGGTAAAGC AATTGAACGT ACCTTTTTAC CTTTAATGCG CTTGCAACTG
CCAGAGATCG TAGATATAAA CATGCCTCCA GAAGGGGTCT TTCACAACTG TGTAATTGTG
TCAATTAAAA AGCGTTATCC TGGTCATGCT AAAAAAGTTA TGAATGCCCT CTGGGGAATG
GGTCAAATGA TGTTTGCTAA ATTAATAATT GTGGTGGATG AACATGTTGA TGTGCAAAAC
CCCTCCCAGG TGGCTTGGCG TGTCTTTAAT AATATTGACG CCAGAAGAGA TGTTATGATT
GTGGATGGCC CATTAGATGC GCTGGACCAT TCTTCTCCTG CACCCTATTA TGGCGCGAAG
ATGGGGATTG ATGCTACGAA AAAATGGCCT GCGGAAGGGC ACAATCGGGA ATGGCCCGAT
GACATTGTCA TGAGTGAGGA AATCATATCT CTGGTAGACA GGAAGTGGAA GAGCTATGGC
TTCTAA
|
|---|
| Protein sequence | MAYQDLRDYM KTLENKGLLK RITTEVSADL EITEITDRVC KSSGPALLFE NVKGYKMPVI
TNMMGSMEMI KLALQVDDLD DIGKEIMTFL NPPELPSSFL DKLKTLPKLA QISSFLPKNV
RSGPCKEVII KDKPSLAVLP VLKCWPMDGG PFITLPLVFT KDPETGRRNV GMYRMQVFDE
TTTGMHWHKH KDGAENHRKQ KQKKQRLEVA VALGADPACI FSSIAPLPPA IDEMLLAGFL
RKEPVEMVKC ETVDIEVPAR AEIILEGYVD PDETRWEGPF GDHTGYYSLA DDYPVFHLTC
ITHRKDPIYP ATIVGQPPIE DNFIGKAIER TFLPLMRLQL PEIVDINMPP EGVFHNCVIV
SIKKRYPGHA KKVMNALWGM GQMMFAKLII VVDEHVDVQN PSQVAWRVFN NIDARRDVMI
VDGPLDALDH SSPAPYYGAK MGIDATKKWP AEGHNREWPD DIVMSEEIIS LVDRKWKSYG
F
|
|---|
| |