Gene Dred_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2196 
Symbol 
ID4955505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2401381 
End bp2402235 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content44% 
IMG OID640181372 
Product4-hydroxybenzoate polyprenyltransferase, putative 
Protein accessionYP_001113536 
Protein GI134300040 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTA AGATAAAGGT TTTTTTTCAA ATGATTAAAT TTGAGCATAC CCTTTTTGCC 
CTGCCCTTTG CCTATATTGG AGCCTTACTT ACAGAACTGA AGATTCCTTC CCTGCATAAC
ATTCTTTGGA TTACCTTGGC TATGGTGGGA GCAAGGACTG CGGCCATGTC TTTTAATCGA
TTGGTTGATC GGCACATTGA CGCCCGGAAT CCCCGTACAG CAAATCGGGC GTTGCCCAAA
GGCTTGCTGA AGAGTCCAGA GGTTTGGCTT TATGTCTTTG TTTCCTTTGG TTTATTAGCT
ATTTCAGCCT ATAACTTAAG TCCCTTGGCC TTTCAGTTGT TTCCGGTTGC TGTTTTTGCC
CTTAGCTTTT ATTCGTATAC CAAAAGATTT ACTTGGACCT GCCATTTCTG GTGTGGTGTG
GCACTGGGCT TAGCACCTCT AGGGGCTTGG ATTGCCATCA CTGGTAGTTT CCACCCGGCG
CCTTTATTAT TGGGATTAGG AGTGCTACTC TGGGTAGCAG GCTTTGATAT TATTTACGCC
TGTGACGATT ATGACTTTGA CCGTAAAGAA GGTATATTTT CTATTCCTGC CAGGTTTGGT
ATTAAAAAAG CCCTAACCAT CTCGACCCTT ATTCATACGT TGGCTCCTTT ATGCTTTCTT
GGTGTAGGCA TTATGCTTCA ATTGGGTTGG CTTTATTATA TGGGTGTAGC CCTTGCTGCT
GGACTGTTGA GCTACCAGCA CATCTTGGTC ACGCCAAACG ATCTATCCCG AACTGGAGTT
GCTTTTTTTA ACCTAAACGG AACCCTAAGT GTATTGATGT TTGCCTGTAC CTTTGTTGAT
ATTCTGTTGC ATTAA
 
Protein sequence
MASKIKVFFQ MIKFEHTLFA LPFAYIGALL TELKIPSLHN ILWITLAMVG ARTAAMSFNR 
LVDRHIDARN PRTANRALPK GLLKSPEVWL YVFVSFGLLA ISAYNLSPLA FQLFPVAVFA
LSFYSYTKRF TWTCHFWCGV ALGLAPLGAW IAITGSFHPA PLLLGLGVLL WVAGFDIIYA
CDDYDFDRKE GIFSIPARFG IKKALTISTL IHTLAPLCFL GVGIMLQLGW LYYMGVALAA
GLLSYQHILV TPNDLSRTGV AFFNLNGTLS VLMFACTFVD ILLH