Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2187 |
Symbol | |
ID | 4958249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2390270 |
End bp | 2390989 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640181363 |
Product | GntR domain-containing protein |
Protein accession | YP_001113527 |
Protein GI | 134300031 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00327996 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTA AGCCTATAAA ACCTAAAAAA ATATACGAAG AAATTGTGGA TCAGCTTAAA GGAATGATAA CTAGGGGTGA ACTTAGCCCA GGGGACAAAC TCTTGCCAGA AAGGGAGCTA GCAGACCAAC TTCAGGTTGG CCGTTCTGCT GTTCGTGAGG CATATCGTGC CCTTGAAGCC ATTGGCATTA TAGAAATCAG AGCTGGTGAA GGAACCTTTG TGCGTGAATT AAATACAAAA TCTATGACGG ACATTATGTC CTTTGCGGTG ATTACCGGAA AGGGTGCTAT ATTAGAACTT CTGGAACTTA GAAAAATTAT TGAAATTGAG GCCGCTGCCC TTGCGGCAGA ACGCTTGACA AAGGATAATT TGATTAACCT TAAAAAATGC TTGGACAAAA TGAAAGAGGA TGTCAATAAA GGGGTAGTAG GTGAAGTATC CGACTTAATA TTTCACCATG CCATTACAGA AGCGGCGCAT AATTCTCTAC TTACGAGAGT TATTAGTTCT GTTTCTGATA CGATGAAAAC TGAGATGAAA AAGGTTCGTG AAAGAATGTA TGAAACGCCT GGCAGACCTG AAATATTATA TAAGCAGCAT GAGGAAATTT ACCAGGCCAT TGTAAATAGA GATCCTGCAG AAGCAAGAAA AGCCATGCTA AACCATTTGG TCAGTACAGA GCAGGTTTTG ATCCAAGTAA TGAATAAAGA TAAGATTTAA
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Protein sequence | MEFKPIKPKK IYEEIVDQLK GMITRGELSP GDKLLPEREL ADQLQVGRSA VREAYRALEA IGIIEIRAGE GTFVRELNTK SMTDIMSFAV ITGKGAILEL LELRKIIEIE AAALAAERLT KDNLINLKKC LDKMKEDVNK GVVGEVSDLI FHHAITEAAH NSLLTRVISS VSDTMKTEMK KVRERMYETP GRPEILYKQH EEIYQAIVNR DPAEARKAML NHLVSTEQVL IQVMNKDKI
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