| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2166 |
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| Symbol | |
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| ID | 4956100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2370308 |
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| End bp | 2371270 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640181342 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_001113508 |
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| Protein GI | 134300012 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR02748] heptaprenyl diphosphate synthase component II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCGATT TTTTTAGCCA GGTTAGGAAA GATCTTCAGG TTGTTGAGCA TGAAATAAAA
ACCATCGTTC AGTCCCGAGA TCCGCTTTTA ACCCAAACCT CAATTCATTT ATTAAATGCC
GGCGGAAAAC GTTTACGTCC GGCTTTTGCG CTTTTGGCAG GTAAGTTCTA TCATTATAGC
TTAGAAAAGC TTTTACCTTT GGCAGTTGCA TTGGAACTTA TTCACATGGC CACTCTGGTA
CATGATGATG TGGTGGATGA CTCCCTAACC AGAAGGGGTA CCCCCACCGT TAAAGCCAAT
TGGGGCAATC GAATCTCCAT GCATACAGGA GATTACCTGT TTGCCAAATC ACTGGTACTG
ATTTCTCAAT ATGAGAACCC ATTAATTGCT CAGGTACTGG CTGATACCAG TGTCATGATG
TGCGAAGGTG AAATGCACCA AATTTCAACA GCCTATAGTG CGGAACAAAG TTGGAGGGAC
TATTTCTATC GGATCAAACG AAAGACAGCT TTATTAATTG CGGCCAGTTG CCAATTAGGC
GCGGTGGCGG TGGGAGCACC AGAGGAAGAG TACAAGAACC TTAGAAGATA TGGGCACCAT
CTCGGTATGG CCTTTCAAAT TACGGATGAT ATTCTAGACA TGGTGGCTGA CCAGAGTCTT
CTTGGCAAAC CCATTGGCGG TGATTTGCGC CAGGGAATTT TGACCATGCC AGTGATATAC
TCTTTGGAAA GAAGCCCTCA AAGAACACGC CTGCGCCAAT TGGTGGAAAT TGAAGAAAAA
ACGGACGAGC AGGTAAAAGA AGCCATTGAA ATTATTAAAG AAGCTGGCGG TATTGAGTAT
GCATTTAATG CCACAAAGCA ATATATCGAA AAAGCCAAGA AAAACTTAAC TCATCTTCCC
AATAAGCCAG TTAAAGAAAC CTTTTATCAG ATTGCTGATT TTATCGGTAT TCGGAGGTTC
TAA
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| Protein sequence | MLDFFSQVRK DLQVVEHEIK TIVQSRDPLL TQTSIHLLNA GGKRLRPAFA LLAGKFYHYS
LEKLLPLAVA LELIHMATLV HDDVVDDSLT RRGTPTVKAN WGNRISMHTG DYLFAKSLVL
ISQYENPLIA QVLADTSVMM CEGEMHQIST AYSAEQSWRD YFYRIKRKTA LLIAASCQLG
AVAVGAPEEE YKNLRRYGHH LGMAFQITDD ILDMVADQSL LGKPIGGDLR QGILTMPVIY
SLERSPQRTR LRQLVEIEEK TDEQVKEAIE IIKEAGGIEY AFNATKQYIE KAKKNLTHLP
NKPVKETFYQ IADFIGIRRF
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