Gene Dred_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2161 
Symbol 
ID4958569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2364588 
End bp2365760 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content47% 
IMG OID640181337 
Productradical SAM domain-containing protein 
Protein accessionYP_001113503 
Protein GI134300007 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000156576 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGTA TTAGTAAGCT GCTCTGTGAT ACACAAAATT ACGGAGACTC TTTGCGCTAT 
GACCATGGCG CCAAGGGGCA GGTGCACGGT GCTGTGGCCG GTCATGGACC GGTGGTGGTT
TGGAACACGA CCCGTACCTG TAACCTGAGG TGTCGTCACT GCTATTCAGA GTCCGACAGT
AAAAAATATA ACGAACTTAA CACCCAGGAA GCCAAGCAAT TTATTAACGA TTTGGCTGAA
TTCAAAGTAC CAGTAATCCT ATTCTCAGGT GGTGAGCCTT TGGTACGCCC GGACTTTTTT
GAACTGGCCG GGTATGCTAC GCAAAAGGGC ATTCGGACCA CCATCTCCAC TAACGGTACT
TTGATTACAC CAGAGGCTGC AGCCCGCATC AAGGATATAG GTGTAGGCTA TGTAGGCATC
AGCCTTGATG GTATTGGCGA AGTTAATGAT ACATTTAGAG GTCGCAAAGG GGCCTATGAA
GCAGCCCTAG CGGGCATTCG CAACTGTTTG GCGGTGGGAC AAAGAGTAGG TCTGCGTTTT
ACCATTAATC GCCATAACCA TACGGAATTA AACCAAATCT TTGATCTTAT TGAACAAGAG
AATATCCCAA GGGTATGTTT TTACCACTTG GTTTACTCTG GTCGGGGCAG TGAAATGATT
AAGGAAGATA TTTCTCTGGA AGAAAGCCGT GCCGTTCTGG ATTTAATAAT GGAACGCACA
CTGGATTTTC ACCGCAGGGG TCTGGACAAA GAGATTTTGA CTGTTGATAA CCATGCTGAC
GCCATTTATC TTTACCTGAA ACTCCTTAAA GAGAACCCAG CACAGGCCCA GAAGGTACTT
GAACTCTTGT CCCGTAATGG TGGCAATCGT ACTGGCATCG CCATTGGTGA GGTGGATTGG
GAAGGAAATG TACATGCCGA CCAGTTTACT CGAAATCACC GCTTTGGGAA TGTCAGAGAA
CGGAAATTCG GAGAGGTTTG GACCGACCTA AGCCATCCCA TTCTGGCTGG GCTCAAGGAT
CGAAAACCAC TTCTCAAAGG ACGCTGTGCC CAATGCAAAT GGCTGAACCT CTGCAACGGT
AATTTCCGAG CCCGGGCTGA AGCTGTCTAT GGAGACTTTT GGATGGAAGA CCCCGCCTGT
TATTTAACCG ATGAAGAAAT AGGGATTGCT TGA
 
Protein sequence
MISISKLLCD TQNYGDSLRY DHGAKGQVHG AVAGHGPVVV WNTTRTCNLR CRHCYSESDS 
KKYNELNTQE AKQFINDLAE FKVPVILFSG GEPLVRPDFF ELAGYATQKG IRTTISTNGT
LITPEAAARI KDIGVGYVGI SLDGIGEVND TFRGRKGAYE AALAGIRNCL AVGQRVGLRF
TINRHNHTEL NQIFDLIEQE NIPRVCFYHL VYSGRGSEMI KEDISLEESR AVLDLIMERT
LDFHRRGLDK EILTVDNHAD AIYLYLKLLK ENPAQAQKVL ELLSRNGGNR TGIAIGEVDW
EGNVHADQFT RNHRFGNVRE RKFGEVWTDL SHPILAGLKD RKPLLKGRCA QCKWLNLCNG
NFRARAEAVY GDFWMEDPAC YLTDEEIGIA