Gene Dred_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2138 
Symbol 
ID4956088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2337278 
End bp2337967 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content37% 
IMG OID640181309 
Producthypothetical protein 
Protein accessionYP_001113480 
Protein GI134299984 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTA TTTGGGAAAT TGCACTTCGG TCAATTGGTG CCTTTTTTGC ATTATTAGTC 
ATCACTAGAA TAGTAGGTAA AGAACAGTTA GGGCAATTGA CAGTTAGTGA TTTTGCAAAT 
GCCATTGCCA TTGGATCTAT AGCGGCGTCT ATGGCCACAG ACCATAAAGA AAACGTGAAC 
TATTACATTA TTGGAATTAT TATCTTTGGT AGCTTAACCT ACCTCACAAA TTTAATTTCA 
TTAAAATACA GACCTGCCAG AAAGATGTTA GAAGGTGAAC CAACAGTTAT GATCCACAAC 
GGCAAGGTTT TAGAAAAGAA TATGAGCAAA GAACGATACA GCATGGATAA CCTAACAATG 
CAGCTCCGGG AGAAAAATAT ATTTAATATC GCAGATGTTG AATTTGCTGT ATTAGAACCA 
AATGGCAGAT TAAGTGTTCT GTTAAAGAGC AACAAACAGC CCCTGACCGC CAGTGATTTA 
AAAATTTCAA CAAACTATAT TGGCATCCCG TCAGAATTAA TTGTTGATGG AAAATTGATT 
AAACAAAATC TGACTCAGAA TAATTTATCA GAGCAGTGGT TAATGGACCA ATTAAAAAAA 
CAGGGCATTC ACAACGTAAA TGAAGTCACC TACGCCAGTT TGGATACGTC AGGGAACCTT 
TTTGTAGACA AGAAGCAGGA TGATTTGTAA
 
Protein sequence
MSPIWEIALR SIGAFFALLV ITRIVGKEQL GQLTVSDFAN AIAIGSIAAS MATDHKENVN 
YYIIGIIIFG SLTYLTNLIS LKYRPARKML EGEPTVMIHN GKVLEKNMSK ERYSMDNLTM 
QLREKNIFNI ADVEFAVLEP NGRLSVLLKS NKQPLTASDL KISTNYIGIP SELIVDGKLI 
KQNLTQNNLS EQWLMDQLKK QGIHNVNEVT YASLDTSGNL FVDKKQDDL