Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2117 |
Symbol | |
ID | 4955785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 2313672 |
End bp | 2314643 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640181287 |
Product | type II secretion system protein |
Protein accession | YP_001113459 |
Protein GI | 134299963 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.215511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTTG AGCAGATTGC CCTGACAATC TTTATTTCCG GAAGCCTGCT GGTTCTGGGC ATTCACCGGA TTCGTTCCAA AGATAGCCTG GAAATCAGTC ATCGCATGAA TAAAATTACA GCAAAAACCT TTCGCCAGCG TCTGGCTCAA AGCGACAGTG AGGAAACCCC AAAGGAAGGT TGGCGGGGAC TCCTTAACCC TTTTTCAAAA ATTTTTGCCA AACAAAGTTT TAGTAAACGT ATGGAAATTG AGTTAACAAA AGCAGATATT CCCTTAAGGG GGGAAGAATT TATTGTTCTG CTCCTCTTGA CCGGTTTTGG GTGCTCCCTT TTCTTTACGT TACTGACCCT GAACCTGGCC TTTGGGGTTG TAGCTGGCTT ATTGGGCTTA ATCGTTCCCT TCTTGTTTAT TCGCATAAAA CGTCAAAAGA GGCTGGCAAA ATTCAACTCC CAGATTAGCG ATGCCCTGGT AATTATGTCT AACTCCCTCC GGTCAGGCTT TAGCTTTCTG CAAGCAATGG ATATGGTTCG CAAGGAACTG CCCAACCCTA TTTCCAAAGA ATTCGGACGC ACCTTTCAAG AAATGAATCT TGGTACCCAA GCTGAAGAAG CTTTAGAGAA TATGGCCCAG CGAGTGAAAA GCGATGATCT GGATTTATTA ATCACAGCCG TCCTCATCCA ACGTCAGGTG GGTGGTAATC TAGCCGAAGT TATGGATAAC ATTGCCGATA CCATTCGTGA GCGGGTAAGA GTCAAAGGCC AAATTCGGAC CCTAACCGCC CAGGGACGTA TTTCCGGATT CGTCATCGGC CTTTTACCCT TTGGCCTAAC AACGGTCATG ATAACCATTA GCCCCAGCTA CATTCTGACC CTTTTTAACA GCCAGCTTGG ACTGCTCATG ATGGGAATGG CCATTATTTC GGAAGTCATC GGTGTTATGT TCATTAAAAA GATTGTTAAT ATCGAGGTGT AA
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Protein sequence | MTLEQIALTI FISGSLLVLG IHRIRSKDSL EISHRMNKIT AKTFRQRLAQ SDSEETPKEG WRGLLNPFSK IFAKQSFSKR MEIELTKADI PLRGEEFIVL LLLTGFGCSL FFTLLTLNLA FGVVAGLLGL IVPFLFIRIK RQKRLAKFNS QISDALVIMS NSLRSGFSFL QAMDMVRKEL PNPISKEFGR TFQEMNLGTQ AEEALENMAQ RVKSDDLDLL ITAVLIQRQV GGNLAEVMDN IADTIRERVR VKGQIRTLTA QGRISGFVIG LLPFGLTTVM ITISPSYILT LFNSQLGLLM MGMAIISEVI GVMFIKKIVN IEV
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