| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2100 |
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| Symbol | |
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| ID | 4956094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2297788 |
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| End bp | 2299773 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640181270 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001113442 |
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| Protein GI | 134299946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGGC CAAAGCTATT TCTCCTATTG GTGAGTTTCA TTATTATATT CAATATCACG
TCCGGTTGTG CGGACATTGG ACAAAGGGAA CCTCCGGATG TACCAACACC TTCTAGGATA
GTGGATGTCA ATAATAAATT AATTACTACC ATATCTCAGA CCAATCAAAT TCCAGTTGAA
TTGGACCAGA TTGCTCCAGA AATGCAACAA GCCATTGTGG CCATTGAAGA TTATCGTTTT
TATGAACATT CTGGCATTGA TATAAAGGGA TTGGCACGGG CGGCTCTCAT AAATATACGT
AACCTTCGTA TAGTGGAGGG TGGCAGTACT ATTACCCAGC AATTGGCAAA GAATTTGTAT
TTGGGGCCTG AACGTACCCT AGGAAGAAAA ATTAAGGAAT TATACTATAC AGTACAATTG
GAGCGGTCTT ATACCAAAGA AGAAATATTG AATATGTATC TGAACCATGT TTATTTTGGA
CAGGGAGCTT ATGGTATTGA GGCTGCGGCC CAGACTTATT TTGACAAACA TGCCCAGGAA
CTAACCTTGG GCGAAAGTGC TTTGCTGGCG GGACTACCCA AGGCACCAAG TTATTACGCG
CCCACAACAA ATTTAGCAGG AGCAAAGCAG AGGCAGCAGG TTGTCTTAAA CAGAATGCTG
GAGTTGGGTA TGATTACACC GGAGAAAAAG AAGCAAGCCC TTGACCAAAC CATAGAACCA
CAGGCCAAAA CAGAGTATTT TCAACAGGCA CCGTACTTTG TTGCAGAGGT GGTTAAGTAT
TTTAAAAATA AATATCCAAA TGGTATGGAG TTACTGTATT CCAGCGGCTT AACCATTCAG
ACTACCCTGG ATATGGATAT GCAGCAAGCT GCTGAACGGG CCATAACCCA GGGATTAGGG
CAGGTTAATA AAGATATGGA AGGGGCCTTG ATAGCCATTG ACCCAAGGAA TGGTTATATA
AAGGCTATGG TTGGAGGACG CAATTGGCAG AAATCTCAAT ACAACCGGGC ATTGGCAAAA
TCACAGCCGG GGTCATCCTT TAAACCATTC CTATACACCG CTGCTATTGA ATCGGGATAT
ACCGCAGCTA CCACTATTTT TTGTAAGCCC ATTACCTACC CTGGGGGATA TAGGCCAAAG
GATTATCATG GCTATCATTA TCGTCCCTTT ACCCTGAAAC AGGCCCTGGC CATTTCAGAT
AACGTGGTAT CTGTTCAATT GGCCGACCGT TTGGGACCAG AAGTACTGGT GCGTTATGCC
AAAGCAATGG GCATTGAAAG TAAACTGGAT CCTTATTTGT CTCTGGCCCT TGGGTCCGCT
GAAGTATCCC CCCTAGAAAT GGCAGTTGCC TTTGGCCCCC TGGCCAATGA AGGAATTCGA
ACAAAACCGC TATCCATCTT AAGGGTAACC GACAGCTCAG GTAGGGTTTT GGAAGAGGCG
CACCCCCAGC GCTACAAGGT CGTTGATGAG AAAGTGGCCT ATATTGTTAC CGATATGTTA
AAGGCTGCGG TGCAACCCGG TGGTACTGCG GCACAAATAT CCCAATTAGT CTCGAGACCA
GTGGCAGGTA AGACAGGAAC CACAGATGAG TCCACCAATG CCTGGTTTGT TGGCTATTCT
CCAGAGCTAG TGGCATCGGT TTATGTTGGG TACGATGATA AAAGTAAAAA GGTTGGTTTA
ACAGGCAGTG ACATTGCTGC ACCTATTTGG GGTAACTTTT TTGAGGAAGC ATTAAAGGGC
ACAGAAAAAA CAGATTTTAA AAAACCCGTG GGGGTTGTTG AGGTTAATAT CTGTGCCTAT
GATGGACTAA AGGCTTCGGT ATTTTCCAGT GACACCTTAA GTGCTTATTT TATTAAGGGG
ACGGAGCCTA AAATACCTTG TTTTGGAGAT TTCTGGTGGA AGGAGCAAGA AGGGCTTAGC
GAGGAGATAC CTGACCAAAG AGGGAAGCAG AAAAAAAGAT TAAATGAGTA TGAGGAGAAT
CAATAA
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| Protein sequence | MQRPKLFLLL VSFIIIFNIT SGCADIGQRE PPDVPTPSRI VDVNNKLITT ISQTNQIPVE
LDQIAPEMQQ AIVAIEDYRF YEHSGIDIKG LARAALINIR NLRIVEGGST ITQQLAKNLY
LGPERTLGRK IKELYYTVQL ERSYTKEEIL NMYLNHVYFG QGAYGIEAAA QTYFDKHAQE
LTLGESALLA GLPKAPSYYA PTTNLAGAKQ RQQVVLNRML ELGMITPEKK KQALDQTIEP
QAKTEYFQQA PYFVAEVVKY FKNKYPNGME LLYSSGLTIQ TTLDMDMQQA AERAITQGLG
QVNKDMEGAL IAIDPRNGYI KAMVGGRNWQ KSQYNRALAK SQPGSSFKPF LYTAAIESGY
TAATTIFCKP ITYPGGYRPK DYHGYHYRPF TLKQALAISD NVVSVQLADR LGPEVLVRYA
KAMGIESKLD PYLSLALGSA EVSPLEMAVA FGPLANEGIR TKPLSILRVT DSSGRVLEEA
HPQRYKVVDE KVAYIVTDML KAAVQPGGTA AQISQLVSRP VAGKTGTTDE STNAWFVGYS
PELVASVYVG YDDKSKKVGL TGSDIAAPIW GNFFEEALKG TEKTDFKKPV GVVEVNICAY
DGLKASVFSS DTLSAYFIKG TEPKIPCFGD FWWKEQEGLS EEIPDQRGKQ KKRLNEYEEN
Q
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