| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2062 |
|---|
| Symbol | |
|---|
| ID | 4956240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2258353 |
|---|
| End bp | 2259012 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640181231 |
|---|
| Product | class II aldolase/adducin family protein |
|---|
| Protein accession | YP_001113404 |
|---|
| Protein GI | 134299908 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000402268 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAGG CAACTGAAAA AGTAAGAGAA ACGGTGGCCC GGCTGGGGAG AAAAATGTTG
GAGTCTGGTT TGGTTGCAGG AACCTGGGGA AATATTTCCT GCCGGTTAGA GGCAGAGAAT
GTTGTGGTTA TTACCCCCAG TGGTATGGAT TATGCTAATC TGCAGCCTTC TGATATGGTT
GTACTGGATC TAGACGGTCG GGTTATCGAA GGGTACCGAA AGCCATCCAG CGAGGCACCC
CTGCACCTTG CAATTTATCG AGCCAGAAAA GATGTGTTGG GGATTGTACA TACTCACAGT
GAAGTGGCAA CAGCCTTTGG AGTTTTAAGG GAGCCCATAG AACCCGTGGT AGAAGATGCA
GCAATGCTAG TTGGCGGTCC TGTGGAAGTG GCCCGGTATG CTTTGCCGGG GACAGAAGAA
CTGGCTCAAA ATGTAGTTAA AGCCCTTGGT GAACGCTATG CGGTACTGAT GGCGAATCAC
GGGCTAGTGG GTGTTGGCCG AAGGGTTGAA GAAGCGTTTA CGGTGTGTCA AGTGGTGGAA
AAGTGCGCAA GGATCTATGC TTGGGCTAAA TCCCTGGGCA AACCTGTCGT TATACCGGAC
CAAGATGTGT CCGAGCTATC TAGGATTTAC CGTAGCTCTT ATGGCCAGCC CCAAAAATAG
|
|---|
| Protein sequence | MVKATEKVRE TVARLGRKML ESGLVAGTWG NISCRLEAEN VVVITPSGMD YANLQPSDMV
VLDLDGRVIE GYRKPSSEAP LHLAIYRARK DVLGIVHTHS EVATAFGVLR EPIEPVVEDA
AMLVGGPVEV ARYALPGTEE LAQNVVKALG ERYAVLMANH GLVGVGRRVE EAFTVCQVVE
KCARIYAWAK SLGKPVVIPD QDVSELSRIY RSSYGQPQK
|
|---|
| |