Gene Dred_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2045 
Symbol 
ID4958621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2244497 
End bp2245087 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content48% 
IMG OID640181214 
ProductNADH-quinone oxidoreductase, B subunit 
Protein accessionYP_001113387 
Protein GI134299891 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0111546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAATAA AGGATCAAGA CAAAGCCGCC AACCCGGTAG CTAAAGATGA GATGTATGAG 
GAAACCGTAA AACGTTTAAA AAAGCTAGGG GCTGAACCGG CTGTCATCGG GGAGGTTGCT
CGAACCGTGT CCGTTGGTCC CTTGGAAAAA CTCTTGAATC TGGCTAGGGC AAATTCACTC
TGGCCTATGG GTTTTGGTTT GGCCTGTTGT GCCATTGAAG GCTTAATGGC AGCTAATATG
GCTAGGTTTG ATTTAGCCAG ATTTGGCTAT GAGGTAATGC GGGCATCTCC ACGACAAGCA
GACGTGATGC TGGTATGCGG CACGGTGACT AAAAAAGCAG CCCCCTTTGT GGTTCGTCTG
TACGAGCAAA TGGCAGAGCC AAAATATGTC ATTGCCATGG GTAGCTGTGC TATTTCCGGT
GGACCCTTTG TGGATTCATA CAGTGTTGTT CCCGGGGTGG ATAAATTAAT CCCGGTGGAT
GTCTATATTC CTGGTTGTGC CCCCCGGCCC GATGCAGTTA TTCATGGGTT TATGAAATTA
AAAGAAAAAA TTATTAATCC TGAGGTGGTG AAACGTGGCG ATGAACGGTA A
 
Protein sequence
MEIKDQDKAA NPVAKDEMYE ETVKRLKKLG AEPAVIGEVA RTVSVGPLEK LLNLARANSL 
WPMGFGLACC AIEGLMAANM ARFDLARFGY EVMRASPRQA DVMLVCGTVT KKAAPFVVRL
YEQMAEPKYV IAMGSCAISG GPFVDSYSVV PGVDKLIPVD VYIPGCAPRP DAVIHGFMKL
KEKIINPEVV KRGDER