Gene Dred_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2044 
Symbol 
ID4958065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2244064 
End bp2244507 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content43% 
IMG OID640181213 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_001113386 
Protein GI134299890 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00833033 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGTA AACCACTGGC AGAAATTATC CAAGAACTTA CAAATAAATA CCCTTCATTA 
GAGGTATCCG AAAAAGGACA TTTAACAGTG CCGGTAGAGT CACTGATGTT ATTTATGCGT 
GATTTAAAGG AAATTTACGG TTTTAATTAT CTTACCAATG TAACTGGAGC GGATTATTTG 
GAGTATCTTG AGGTTGTCTA TAACCTTTGT ATCATAGGAC ATCCAGAAAT GCTTCATGTA 
AAGACCAGGC TTGATCGAAA TAACCCAGAG GTTCCCTCAA TGGTGCCCAT CTGGGGTGGA 
GCCATCTGGC AGGAAAGGGA AGTTTTTGAC TTGCTGGGCA TTGTCTTTAC GGACCATCCT 
GATTTAAGGA GAATCTTACT GGCCGATGAT TGGGAAGGTC ATCCTCTCCG CAGGGATTAT 
CAGTGGGAGG GTGGCCGAGA ATAG
 
Protein sequence
MNGKPLAEII QELTNKYPSL EVSEKGHLTV PVESLMLFMR DLKEIYGFNY LTNVTGADYL 
EYLEVVYNLC IIGHPEMLHV KTRLDRNNPE VPSMVPIWGG AIWQEREVFD LLGIVFTDHP 
DLRRILLADD WEGHPLRRDY QWEGGRE