Gene Dred_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2037 
Symbol 
ID4957388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2237072 
End bp2238586 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content46% 
IMG OID640181206 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_001113379 
Protein GI134299883 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCC CGGTACTAAC TATAACCTTG CTTTCTCCTA TGCTGGCTGC CTTTGTTATT 
ATGTTTATCC CAAAGGAAGA AGAAAAGCTT TGTAAATGGG TAGCTGCCGC TGGTACAGGA
ACTGCGTTGC TCCTCAGCTT GTACGTTTAT TTTGGGTACG ACCAAACCTT GGGAGGCCTA
CAATGGGTAG ATTTCGGCGG ACCCATTCCG TGGATTCGAG ACCTTGGGGT GTCCTATTAT
ATGGCAGTGG ACGGCTTGAG TTTACCGATG CTGCTGCTGA CCAATCTAAT CGGTTTTTCA
GCCGTGTTTG CATCTTGGAA TGTAACACTA AGGGCCAAGG AACTGATGAT TTATTTACTT
ATTTTAATTG CTGGTGTTAT GGGAACCTTT ATAGCCCAAG ACTTGTTTAT CTTCTTGCTG
TTCTATGAAG TAGTGGTTAT TCCTATTTAC ATTATGGTTA TCATCTGGGG GAGCTCAAAA
AGAGTTACCA AAGAATATGC CGGTATGAAG CTGACCATTT ATTTGTTAAT TGGATCTGCC
TTCCTGCTGG TAGGGGTTAT TGCTACCTTT GTAAAGTCTG TAGCCATAAC CGGTGTACCC
AATATGAGCT TTGAAGCACT GGCACAGGTT GCCTTTCCGG AACAGTTCCA AATCTATATG
TTTGCATTAA TGCTAATCGG ATTTGGATCA CTGCTCTCCA TGTGGCCCTT CCATTCCTGG
TCACCGGATG GCTATGCTGG TGCCCCTACT GCAGTTTCTA TGATTCACGC AGGGGTATTA
AAGAAAATTG GGGGATACGG TCTGATTCGG TTTGCTGTTT TTGTACTGCC CTTGGGTGCT
AAATTTTGGG CTCCCTATAT TGCAGTTTTG GGTGTGATTG GTGTTGCCTA TGCCGCAATG
GGAGCACTGG CCCAAAAAGA TCTTAAATAT GTGGTCGGTT ATTCCTCTGT GTCTCACATG
GGATATGTAC TACTGGGGGT AGCTTCCCTA CAAGTGATTG GGGTTAACGG GGCTGTGGCG
AATATGTTTG CCCATGGTGT GATGGCAGCT TTGTTCTTCT CTATGATTGG ATTTATTTAT
GAAAAGACCC ATACCCGTTG GATTCCAGAT CTAGGGGGGA TATCCCATCA GGCACCTCGG
CTGTCCGTAG GTTTTATGAT GGCAGCCTTG GCTTCCTTGG GTTTACCGGG GTTAATTAGT
TTCGTGCCCG AGTTTGTAAT TTTTGTACAA TCCTTCAAGA GCTTTGGTTT ACTGGCAGTG
GTGGCCATTG CCGGAATTAT TATAACAGCG TTGTATGTAC TACGGGCCGG TGCCAACACT
CTCTTTGGAC CTGCCAGAGA AGAATACAAC CATATTAAAG ACATTCGGGG AGCTGAACTG
GTACCGCTGG TTGTACTGGG TAGCGTTCTG GTCATTGGAG GAATACTTCC CTCACTGCTG
TTTGATATGG TGAATAGCGG GGTAGCGCCT ATTCTGGCAC ATATTAATGA AGCCCTGCAG
TTAGGGGGGA GATAA
 
Protein sequence
MSIPVLTITL LSPMLAAFVI MFIPKEEEKL CKWVAAAGTG TALLLSLYVY FGYDQTLGGL 
QWVDFGGPIP WIRDLGVSYY MAVDGLSLPM LLLTNLIGFS AVFASWNVTL RAKELMIYLL
ILIAGVMGTF IAQDLFIFLL FYEVVVIPIY IMVIIWGSSK RVTKEYAGMK LTIYLLIGSA
FLLVGVIATF VKSVAITGVP NMSFEALAQV AFPEQFQIYM FALMLIGFGS LLSMWPFHSW
SPDGYAGAPT AVSMIHAGVL KKIGGYGLIR FAVFVLPLGA KFWAPYIAVL GVIGVAYAAM
GALAQKDLKY VVGYSSVSHM GYVLLGVASL QVIGVNGAVA NMFAHGVMAA LFFSMIGFIY
EKTHTRWIPD LGGISHQAPR LSVGFMMAAL ASLGLPGLIS FVPEFVIFVQ SFKSFGLLAV
VAIAGIIITA LYVLRAGANT LFGPAREEYN HIKDIRGAEL VPLVVLGSVL VIGGILPSLL
FDMVNSGVAP ILAHINEALQ LGGR