Gene Dred_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2023 
Symbol 
ID4955398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2227052 
End bp2228581 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content45% 
IMG OID640181192 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001113365 
Protein GI134299869 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00011944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGCTA TAATTGATAG TGTGGCTTTA CTTGGTTTAG ATGGCCAACG AGTTCGAGTA 
GAGGTAGATG TTTCCAATGG TCTGCCTTGT CTAGATATCG TCGGATTACC TGATGCTGCC
GTTCGGGAGG CAAAGGACCG AGTTCGATCT GCCATAAAAA ACTCCGGCAT GGATTATCCC
ATTCAAAGAA TAACCGTAAA CTTAGCACCA GCTGACCTTC GTAAGGAAGG CCCAGTATTT
GATCTGCCCA TTGCTGTAGG AATTTTAGCA GCTACTGAAC AAATTAATTC CGAGTTTACG
CTGGGGATAC TCTTTTTAGG TGAGTTATCC CTAGATGGTT CTTTACGTGG TGTGCACGGG
GTATTGCCCT TGGTTATGGC AGCCAGAGAC TTAGGGTTAA AAAGGGTGGT TGTTCCCTTG
GCAAATGCAG CAGAAGCAGC TTTAGTACAG GATGTAGAAG TATTTGGAAT AAAAAATCTG
GCAGAATTAG CTGTGGCGCT AAAGGGAGAA ACAGAATTAA AACCTTACTT AGTTGAAGAG
TTACCCACGG GTGTTTTACA TGAAGAAGGA TTGGATTTTG CTGATGTACG AGGACAGGCG
GTAGCCAAGC GGGCAATGGA GGTGTCCGCT GCAGGGGGCC ACAATATTCT TATGCTTGGT
AGTCCGGGCT GTGGCAAGAC AATGTTGGCC AGAAGACTGC CCTCTATTCT ACCGGATCTT
ACCTTTGAGG AATCTTTGGA GGTCACAAAG GTTTATAGTC TGGCTGGACG CCTATCTTCC
GAAAACCCCC TAATAAAAAA ACGACCTTTT CGGGCTCCTC ATCACACCAG CTCAACTGCC
AGCTTGGTTG GCGGTGGGCG AGTCCCCAAA CCCGGAGAGA TTAGTCTTGC TCATTATGGC
ATACTTTTTA TGGATGAACT TCCAGAATTC CACAAGGATA GCTTAGAGGC ACTTAGACAA
CCTTTGGAAG ATGGATGTAT CAGTGTTTCA AGAGTAGCTG CTAGCTTTAC GTTCCCTGCT
AAAATTATGC TGGTGGGAGC GGCTAACCCT TGTCCCTGTG GATATCAGTT AGATAAAGAG
AAAGAATGCA CTTGTACACC ACACCAGATT CAAAAATATA TCAATAGAAT ATCTGGGCCT
CTATTAGATC GGATTGATAT TCACCTGGAA GTACCCAAAG TTTCTTATGA AGAATTAAAC
AATGCTCCCC CAGGAGAAGA ATCTTACTCT ATAAAATTAA GGGTAGAAAA TGCCCGAGCC
ATTCAAAGGG ATCGTTTTAA AAATACATCA ATAACTTGTA ATGCATCTAT GGGGGCAAGG
GAAGTGCGAC GCTTTTGTAA GCCAGATTTG CCTGGGGCAA TGCTGTTACA AGAAGCTTTT
AAAAAACTGG GATTAAGTGC CCGGTCCCAT GATCGTATTT TAAAAGTAGC CAGAACCATT
GCTGATTTAG CCGGGAGTGA GATTATAGGA ACCAAGCATC TGGCAGAGGC TATACAGTAC
CGAAGCTTGG ATCGTTTATT GAGGGGTTAA
 
Protein sequence
MLAIIDSVAL LGLDGQRVRV EVDVSNGLPC LDIVGLPDAA VREAKDRVRS AIKNSGMDYP 
IQRITVNLAP ADLRKEGPVF DLPIAVGILA ATEQINSEFT LGILFLGELS LDGSLRGVHG
VLPLVMAARD LGLKRVVVPL ANAAEAALVQ DVEVFGIKNL AELAVALKGE TELKPYLVEE
LPTGVLHEEG LDFADVRGQA VAKRAMEVSA AGGHNILMLG SPGCGKTMLA RRLPSILPDL
TFEESLEVTK VYSLAGRLSS ENPLIKKRPF RAPHHTSSTA SLVGGGRVPK PGEISLAHYG
ILFMDELPEF HKDSLEALRQ PLEDGCISVS RVAASFTFPA KIMLVGAANP CPCGYQLDKE
KECTCTPHQI QKYINRISGP LLDRIDIHLE VPKVSYEELN NAPPGEESYS IKLRVENARA
IQRDRFKNTS ITCNASMGAR EVRRFCKPDL PGAMLLQEAF KKLGLSARSH DRILKVARTI
ADLAGSEIIG TKHLAEAIQY RSLDRLLRG