Gene Dred_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2013 
Symbol 
ID4956218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2212100 
End bp2212951 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content36% 
IMG OID640181179 
ProductAAA ATPase 
Protein accessionYP_001113355 
Protein GI134299859 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0083652 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACT TTAACCCTGA GAAGGTAATT AAGGATTTAA AAGCAAGGAA TAAGGAAACC 
CCAAGCAAAG AAAAAAGGAT AACAAAATTT GAGTGTAATA AATGCCAGGA CAGGGGAATT
TATATGGAGG GTGAATTTGC GGTCCCTTGC CAATGTGTTA AAAGAAGGTC TCTGGAAAAT
AAATTCAAGA ATTGCCAGAT ACCAAAATCC ATGCTAAAAC ATTCCTTTAA CAATTTTGAT
TTTAGATATT ATTCTTCATC TTTAAAAGAA CCTTTATCTA AAAGAACTTA TTTAGAAATA
GCACAAAAAA CCTATCTGTT TGCTCAGGAA TTTGCCAGGG ATTTTATAAA GGGAAAAGTG
ACGGAGGGAC TATTGATTCA AGGGCCTGTG GGGTCGGGCA AAACATTTTT GGCCTGTTGT
ATTGTTAATC AAGTGTTACG TAATTCTGAT AAAGAGGTTT TGTTTGTAAT TGTTCCAGAT
TTGTTAGAAA AAATAAAAGC CAGCTATAGT AATGCCGCTG GTGGTTATTC AGAGTATACC
CTCGTGGAAG CTGCCTGTGA AATACCCTTA TTAGTTATGG ACGATTTAGG TGCACATAGC
TATACAGAGT GGACCAAAAA TAAACTTTAT AACATAATAA ACTATCGGGT GAATCATGAA
TTACCGACAA TCATAACCAC CAATCTAATT CTGGCAGGAG ATTTAACAAA TTTAATAGGT
GAACGCACGG TCTCACGGAT TGAACAAATG TGCCGTCCTC TATGGCTCGA ACGGGAAAGG
GATATCCGGG AGGTATTAAG GGAAGAAAAA GCGGGGCAAA TTAGACATTC AAGTTTTTTT
GAAAAAATAT AA
 
Protein sequence
MDYFNPEKVI KDLKARNKET PSKEKRITKF ECNKCQDRGI YMEGEFAVPC QCVKRRSLEN 
KFKNCQIPKS MLKHSFNNFD FRYYSSSLKE PLSKRTYLEI AQKTYLFAQE FARDFIKGKV
TEGLLIQGPV GSGKTFLACC IVNQVLRNSD KEVLFVIVPD LLEKIKASYS NAAGGYSEYT
LVEAACEIPL LVMDDLGAHS YTEWTKNKLY NIINYRVNHE LPTIITTNLI LAGDLTNLIG
ERTVSRIEQM CRPLWLERER DIREVLREEK AGQIRHSSFF EKI