Gene Dred_2010 details

Gene Information

• Locus tag: Dred_2010
• ID: 4956004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 2210916
• End bp: 2211395
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640181176
• Product: hypothetical protein
• Protein accession: YP_001113352
• Protein GI: 134299856
• COG category: [S] Function unknown
• COG ID: [COG2839] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000106435
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAACAC CAGGGCTAAT TATAGCTAGT ATCTTTTTCA TTGTGGGAAT GGCAGGTATT 
TTTCTTCCAA TTTTACCCGG AGCCCCTTTG CTACTGGCCG GAATGCTTGT TTACGGTTTT 
TTTGAGCATT TTACTCACTT AACATGGCAG TTTTTTGCTG GCCAGTCTAT TTTAGTTGCC 
TTTGTATTTG GTATTGATTA TTTGGCTAGC ATTTGGGGGG TTAAAAAATA CGGGGGCTCA 
AAATACGCCG TCTGGGGTTC CATTATCGGT ACCATTATGG GACTCTTTCT ACTGGGCCCC 
CTTGGCGTCA TAATAGGACC CTTTCTGGGT GCGGTATTTG GCGAATTAAT TGTTTGCCGC 
AATTATAACC AGGCATTTAA AGCTGGTTTA GGTACACTAA TTGGTTTTTT AGGAGGTGCA 
CTTGCCAAAC TATTTTTACA AATATTAATG ATAATATGGT TCTTTAACGT TATTCAATAG 

 

Protein sequence

MSTPGLIIAS IFFIVGMAGI FLPILPGAPL LLAGMLVYGF FEHFTHLTWQ FFAGQSILVA 
FVFGIDYLAS IWGVKKYGGS KYAVWGSIIG TIMGLFLLGP LGVIIGPFLG AVFGELIVCR 
NYNQAFKAGL GTLIGFLGGA LAKLFLQILM IIWFFNVIQ