Gene Dred_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2008 
Symbol 
ID4956476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2208518 
End bp2209243 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content39% 
IMG OID640181174 
Productglutamine amidotransferase 
Protein accessionYP_001113350 
Protein GI134299854 
COG category[R] General function prediction only 
COG ID[COG3442] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0374573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGG TTTGTCATCT ATATCCTGAT TTACTAAATT TATATGGTGA CAGGGGAAAT 
GTAATTGCCT TTGTTCAGCG CTGTTGTTGG CGAAAAATCC CCGTTGAACT TATAGAAGTT
AATGTAGGGG AACCTGTGGA TTTTAATGAG ATTGATTTCT TGTTTCTTGG AGGAGGTTCT
GATCGAGAGC AGAATTTAAT GGCAGCGGAT TTGCTACAAA GGAAGAATTC TCTAAAAGAA
GCCATTGATA AAGGACTTGT GGTCTTAGCC ATTTGTGGAG GGTATCAGAT GCTGGGTCAA
TACTACTTAA CATCTGATGG TCAGAAGATA CCCGGCTTAG GTATTTTGGA CCTTTATACG
AAGGCTGGAC AGCAAAGGCT CATAGGCAAT GTTGTTTTAG AAATGAAGAT TGCAAATCAA
TCTGTCAATG TGGTAGGATT TGAAAATCAT TCAGGGCAAA CCTTTATTGG TAATCTTGAT
CCACTTGGAA AAGTTCTTGT TGGTCATGGT AACAATGGAC AAGATGGCTC GGAGGGGGCA
AGGTATCAAA ATGTCTTTTG CTCCTACTTA CATGGACCTC TCTTACCGAA GAATAGCAAG
TTTACAGACA TGTTAATACA GCTCGCTCTT GAACGGCGGG GGATAAAAAC GGATTTGATA
CCACTTGAGA ATGAATTTGA AGAGGCAGCT GTCAAAGTAA TGATAGACAG ATATTTGAAA
AAATAA
 
Protein sequence
MLKVCHLYPD LLNLYGDRGN VIAFVQRCCW RKIPVELIEV NVGEPVDFNE IDFLFLGGGS 
DREQNLMAAD LLQRKNSLKE AIDKGLVVLA ICGGYQMLGQ YYLTSDGQKI PGLGILDLYT
KAGQQRLIGN VVLEMKIANQ SVNVVGFENH SGQTFIGNLD PLGKVLVGHG NNGQDGSEGA
RYQNVFCSYL HGPLLPKNSK FTDMLIQLAL ERRGIKTDLI PLENEFEEAA VKVMIDRYLK
K