Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2002 |
Symbol | |
ID | 4956844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2200669 |
End bp | 2201619 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640181169 |
Product | ATP dependent DNA ligase |
Protein accession | YP_001113345 |
Protein GI | 134299849 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACA GTAAGTTACC AAAGGTAAAA CCTATGTTAG CTGTACCAGC AGACCCCTTT GATAGCAATG ATTACTTATA TGAAATAAAA TGGGATGGTT ACCGTGGGTT AGTCTATCTA AGTGAGCAAA CAACCATTCT CTCAAGAAAT TTAATAAATC TCACGGAAAG GTTTCCCGAA TTGCAAAATT TACATAAAAA AGTTATACAG AAACCAGCCA TATTGGATGG AGAAATTGTA GTGCTGGAGG AAGGTAAACC ATCCTTTAGC AAACTTCAAT CTAGGGGAAA GATAACGGAT GCTTTAAAAG TGAATCAGCT ATCCAGACGT TTTCCTGTAA GCTTTATTGC CTTTGATGTT TTATACAAAG ACGGCGAGAG TATTATGAAT TTACCACTGG AGAGCAGAAA AAAAGTCCTT GAGGATATTA TAGAGCCGGG AACCCATTTG ATTGTATCTC AATATGTACA TGGTTCGGGT ATTAAATTTT ATGAAGCAGT TCAGAAAGTT GGGCTTGAGG GAATGATGGC GAAACGGTTA GATAGTTTAT ACATGCCTGG GAAAAGGTCA CCAGTCTGGA AAAAAGTACG CAATACTCAT TCGGCAGAAT GGGTTATTGC CGGTTGGGAA AAGGGAGAAG GTCACCGGCA TCTAGGTTCC CTGATACTAG TTGGTTTTAA TCAAGGTAAA TGGATATACA TGGGGAAGGT AGGGACCGGC TTTGGCAAAG ATGACGAGAA CAAATTATTG AGACTAATGG AACCATTAGA GATTGATGAA TCGGTTTTTA CTCCCCCTAG GGGAGAGTTT CGATCTCCTG TTTGGGTTAA ACCGACATTA ATTTGCGAAG TGACATTTAC CGAAATCAGT CCAGAGGGTA GATTGAGGCA CCCCAGTTAT AAAGGACTAC GGTATGATAA GAACCCGCAG GAATGCACAA TAGATCAATA G
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Protein sequence | MNNSKLPKVK PMLAVPADPF DSNDYLYEIK WDGYRGLVYL SEQTTILSRN LINLTERFPE LQNLHKKVIQ KPAILDGEIV VLEEGKPSFS KLQSRGKITD ALKVNQLSRR FPVSFIAFDV LYKDGESIMN LPLESRKKVL EDIIEPGTHL IVSQYVHGSG IKFYEAVQKV GLEGMMAKRL DSLYMPGKRS PVWKKVRNTH SAEWVIAGWE KGEGHRHLGS LILVGFNQGK WIYMGKVGTG FGKDDENKLL RLMEPLEIDE SVFTPPRGEF RSPVWVKPTL ICEVTFTEIS PEGRLRHPSY KGLRYDKNPQ ECTIDQ
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