Gene Dred_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1990 
Symbol 
ID4957917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2186709 
End bp2187992 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content41% 
IMG OID640181157 
Productcitrate transporter 
Protein accessionYP_001113333 
Protein GI134299837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000159271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGGAA ACAGCCAGGT GATTTTTGCC ACAGCAGTAT TTTTACTAAC CTATGCCATT 
ATCATTTCCG AAAAGATTCA CAGGGCAGTG ATAGCACTTT TGGGTGCGAT GATTGTTATC
GTTGGGGGGG TTCTTCAACA AGAGAAGGCC ATAGAGGCAA TTGATTTTAA TACCATAGGC
CTCTTGGTCG GCATGATGAT AATCGTGGGT ATTGCTAGAA ATTCAGGGGT TTTTGAATAT
CTAGCGGTAA AGGCGGCCAA GAGCAGTAAA GGGGAACCCT TAGCTATACT CATATCATTG
TCATTAATTA CTGCATTGTT GTCAGCTTTA CTGGATAATG TAACAACTGT GTTACTAATT
GTTCCAGTGA CCTTTTCCAT TGCAAAGTCT TTGGAAATAA ATCCATCTCC TATTTTAATC
TCAGAGGTTT TATCATCCAA TATAGGTGGT ACAGCAACCC TCATAGGTGA CCCACCAAAT
ATTATGATTG GTTCTGCAAC GGGCCTTGGG TTTATGGATT TTGTATTTAA TCTAGCCCCG
GTAATTATAG TTATTATGGC TGTTACGGTG TTTCTTTTAA AGATGCTTTA TAAAAAACAA
CTGGTAGTTC GCGAAGAATT AAAGCAAAAC ATTATGGCAT TGAATCCCTT GGATGAGATA
AAGGATGTTG TTTTATTAAA GAAATCATTA TTTGTGATTG CATTAACCAT AGGCGGGTTT
TTATTGCACC AATATGTACA CTTAGAATCG GCAACAATTG CTCTGGGTGG AGCGGCGTTA
CTGTTGCTGA TTACTGGAGA TGAACCAGAA CATGCCTTGG CAGCCGTAGA GTGGCCAGTA
ATTTTCTTCT TTGCCGGACT ATTCATTTTG GTTGGCGCCC TTGAAGAAGT AGGGGTCATT
GAGTGGATTG CTAAGGAGGC CTTAAAACTG ACCGGGGGAG AAATGCTTTC TACGGGTTTG
CTGATCCTAT GGCTTTCAGC CATTGCCTCA GCCTTTGTGG ATAATATTCC CTTTGTGGCC
ACCATGATTC CGTTAATTCA AGATATGGGG AGATTAGGTG GTATCACCGA CCTTAATCCC
CTCTGGTGGT CTTTATCTCT GGGTGCCTGT CTAGGTGGCA ATGGTACTAT TATTGGTGCA
TCTGCAAACG TAGTAGTGGC AGGAATGGCG GAAAAACGAG GTTTAAAGTG GACCTTCATT
GGTTTTATGA AAGTTGCCTT TCCTCTGATG CTTGTATCAA TTATTATATC GACCGTATAT
CTGTACTTCT TTTATTTGAC ATAG
 
Protein sequence
MEGNSQVIFA TAVFLLTYAI IISEKIHRAV IALLGAMIVI VGGVLQQEKA IEAIDFNTIG 
LLVGMMIIVG IARNSGVFEY LAVKAAKSSK GEPLAILISL SLITALLSAL LDNVTTVLLI
VPVTFSIAKS LEINPSPILI SEVLSSNIGG TATLIGDPPN IMIGSATGLG FMDFVFNLAP
VIIVIMAVTV FLLKMLYKKQ LVVREELKQN IMALNPLDEI KDVVLLKKSL FVIALTIGGF
LLHQYVHLES ATIALGGAAL LLLITGDEPE HALAAVEWPV IFFFAGLFIL VGALEEVGVI
EWIAKEALKL TGGEMLSTGL LILWLSAIAS AFVDNIPFVA TMIPLIQDMG RLGGITDLNP
LWWSLSLGAC LGGNGTIIGA SANVVVAGMA EKRGLKWTFI GFMKVAFPLM LVSIIISTVY
LYFFYLT