| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1985 |
|---|
| Symbol | |
|---|
| ID | 4958029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2180419 |
|---|
| End bp | 2181513 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640181152 |
|---|
| Product | DNA protecting protein DprA |
|---|
| Protein accession | YP_001113328 |
|---|
| Protein GI | 134299832 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.435802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAATC GTTTAGGATG GATAGGGTGG CAGATTCTTC TGCCAGGCAG TGGTCGACGC
GTATGGGATA TCATTCACCA TTTTGGATCT CCCGTAGAGG CTTGGCAAGC GTCTGAGAAT
GATTTACAAG GGGTTCCCTG TGTCGGGGTC CAGGGTGCTA GGAAACTAGT ACAACGCAGA
AAGAACATTC AGTTTGATAA CTTGGAAAAA TATCTTGAAA AAATCAGTTG TAAAGTTCTT
ACAATTGATG ATGAAACCTA TCCATATTTA CTAAAATGTA TCCATGATCC GCCGCCGGCC
ATTTTTGTCA GGGGTCATTT GCCACAGGAT GATTGTATAG GAATAGCAAT TATTGGATCC
AGAAAACCTT CTCCCTATGG CCTAGTGGTC ACCGAAACCC TGGCAGGAGA ACTGGCTAGG
GGAGGTATAG AAATTATCAG CGGTATGGCC CGGGGGATAG ACAGTGCTTC CCACCGAGCG
GCATTGATGA ATAATGGCAT GACAATGGCT GTGCTGGGAT GCGGGCCAGA TATTGTGTAT
CCTAGAGAAA ATGAGAAATT AATGAAACAA ATTATTGAAA AGGGTGCCAT TATTACAGAA
TTTCCGCCGG GTACCATGCC TGAGCCATGG CACTTTCCTA GTCGAAACCG GATTATCAGC
GGATTAAGCA GTGCAGTTGT GGTGATAGAG GCAGCTGAAA AAAGTGGTGC TTTAATAACG
GCAGACTTTG CTTTGGAGCA GGGAAGGGAA GTTATGGCAG TTCCTGGTAA TATTAACAAC
CCCAAAAGTG CCGGAACCAA TAAGTTAATA AAGCAAGGGG CTAGCTTGGT TACGGGAGCT
TTAGACATTT TGAAAGAACT AGGGATAGAG ACAAAGGATA TTAAAAGTCA ACAAAAAAAA
TCGAAGAAGG TAACCTTGGA AGTCAATGAA AAAAAGGTTT TAGCAGTATT ATCGGAAATC
CCTCAAACGA TGGAGCAAGT TATTAATTTA AGTAAGTTGT TGCCAGAAGA GGTTGCAGCA
GCTTTAACGA TATTAGAAAT AGAAGGTTTA ATCAGATCCC TTCCTGGAAA AATGTATATT
AATGCTGGGT TATAG
|
|---|
| Protein sequence | MDNRLGWIGW QILLPGSGRR VWDIIHHFGS PVEAWQASEN DLQGVPCVGV QGARKLVQRR
KNIQFDNLEK YLEKISCKVL TIDDETYPYL LKCIHDPPPA IFVRGHLPQD DCIGIAIIGS
RKPSPYGLVV TETLAGELAR GGIEIISGMA RGIDSASHRA ALMNNGMTMA VLGCGPDIVY
PRENEKLMKQ IIEKGAIITE FPPGTMPEPW HFPSRNRIIS GLSSAVVVIE AAEKSGALIT
ADFALEQGRE VMAVPGNINN PKSAGTNKLI KQGASLVTGA LDILKELGIE TKDIKSQQKK
SKKVTLEVNE KKVLAVLSEI PQTMEQVINL SKLLPEEVAA ALTILEIEGL IRSLPGKMYI
NAGL
|
|---|
| |