| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1982 |
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| Symbol | |
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| ID | 4958104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2175734 |
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| End bp | 2176630 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640181149 |
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| Product | tyrosine recombinase XerC |
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| Protein accession | YP_001113325 |
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| Protein GI | 134299829 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0026523 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGTTT TAATAGATAA CTTTGTTAAT TATTTAAAAG TACAAAAAAA TTTTTCTATT
CATACCATTG AGGCTTACCA GAAAGATTTA TTTGATGGTT TGGATTACTT TTCAATTGTC
TTAAATAAAC CAATTGAAAA AATGGATCAC GCATCAATTA ATAGTAGTTT GGTAAGGGAA
TTTCTGGCCT ATCTAAGACA AAAAAACTTA AGTAGAGCAA CGGTGGCCAG AAAACTTGCT
TCATGGAGAG CTTTTTTTAA ATTTCTTTAT AATGAAAGGT TAGCCTATAC CAATCCGATG
CTACGGGTGG CTAATCCTAA ACGGGAGAAA AGATTGCCTA AGTTCTTATA CCAGGAGGAG
ACGAAACAAC TGGTGGAAGC ACCAGATCAT TCTCCTCTAG GCATTAGGGA CCGGGCGCTG
CTGGAGTTGC TCTATGCCAC TGGCATACGT GTGTCAGAAC TGGTTGCTTT AGATCTTAGC
AATATTGATT TGGCCAGGGG ATATATCAGG GTAATGGGAA AAGGATCTAA GGAACGGGTC
GTTCCATTCC ATCAAAGTGC AGTGGCAGCA ATGAAAGAAT ATTGTAGAAA TGCTCGACCT
AAAATGGTAA TAAAAGACTG TGAGGCTGTT TTTGTTAACT ATAAAGGGAC TCGGTTAAGT
GATAGGGGTA TTAGAAAAAT AGTGGATAAA TACTGCCAAC GACTTGGCAT GAAATTAAAT
GTTAGTCCCC ATACAATTCG TCATTCATTT GCTACTCATT TACTGGATAA CGGAGCAGAT
TTACGCAGTG TTCAGGAGTT ACTTGGGCAT GTTTCTTTGT CAACAACTCA GATCTACACC
CACGTAACAA AGAAAAAAAT TAAGCGAGTT TATAAAATGA GCCACCCAAG GGCGTAG
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| Protein sequence | MYVLIDNFVN YLKVQKNFSI HTIEAYQKDL FDGLDYFSIV LNKPIEKMDH ASINSSLVRE
FLAYLRQKNL SRATVARKLA SWRAFFKFLY NERLAYTNPM LRVANPKREK RLPKFLYQEE
TKQLVEAPDH SPLGIRDRAL LELLYATGIR VSELVALDLS NIDLARGYIR VMGKGSKERV
VPFHQSAVAA MKEYCRNARP KMVIKDCEAV FVNYKGTRLS DRGIRKIVDK YCQRLGMKLN
VSPHTIRHSF ATHLLDNGAD LRSVQELLGH VSLSTTQIYT HVTKKKIKRV YKMSHPRA
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