Gene Dred_1977 details

Gene Information

• Locus tag: Dred_1977
• Symbol: tsf
• ID: 4958358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: -
• Start bp: 2171263
• End bp: 2171916
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640181144
• Product: elongation factor Ts
• Protein accession: YP_001113320
• Protein GI: 134299824
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0264] Translation elongation factor Ts
• TIGRFAM ID: [TIGR00116] translation elongation factor Ts

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00032588
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAA TTTCTGCAAG CATGGTTAAA GAGTTAAGAG AACGTACTGG TGCAGGTATG 
ATGGATTGTA AAAAGGCTTT AGCTGAAGTG GGCGGGGATA TGGAAAAGGC CATTGAGTTT 
TTGCGTGAAA AGGGTCTTGC TGCTGCTGCT AAAAAAGCTG GTAGAATTGC CGCTGAAGGT 
GTTGTGGAAT CCTACATACA TGGTGGCGGT CGTATCGGTG TTTTGGTTGA AATCAACTGT 
GAAACTGATT TTGTTGCTAA AAACGAAGAT TTTCGCGGTT TAGCCAAAGA CATTGCTATG 
CAAATCGCGG CTGCTAAACC TGAGTTCGTG CGCCGGGAGG AAGTTTCTGC AGATAAGATT 
GAAAAAGAAA AAGAAATCTT AAGAGCACAG GCGTTAAATG AAGGCAAACC AGAAAAAATT 
GTCGAAAAAA TGGTTGAAGG GCGTATTGAG AAATTCTACA AAGAAGTTTG CCTGCTTGAG 
CAACCCTTTA TTAAAGATTC TGACAAAACA GTGCAGCAAG TTATTAACGA AATCATTGCC 
AAGATCGGCG AAAAAGTTGA TGTTCGTCGT TTTGTCCGTT ATGAAATGGG AGAAGGCTTA 
GAAAAGCGTC AAGATGACTT TGCTGCCGAA GTAGCTGCAC AAATTAAAGC ATAA 

 

Protein sequence

MAEISASMVK ELRERTGAGM MDCKKALAEV GGDMEKAIEF LREKGLAAAA KKAGRIAAEG 
VVESYIHGGG RIGVLVEINC ETDFVAKNED FRGLAKDIAM QIAAAKPEFV RREEVSADKI 
EKEKEILRAQ ALNEGKPEKI VEKMVEGRIE KFYKEVCLLE QPFIKDSDKT VQQVINEIIA 
KIGEKVDVRR FVRYEMGEGL EKRQDDFAAE VAAQIKA