Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1969 |
Symbol | |
ID | 4957147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2164544 |
End bp | 2165587 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640181136 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_001113312 |
Protein GI | 134299816 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAT TTATCGCTTC GGTTGCTGTC TTTGGATTAT TAATATTTTT CCATGAGCTA GGCCATTTCC TGGTAGCAAA GAAGGTAGGA ATCATGGTTC ACGAATTTAG CTTGGGTTTT GGACCTAAGG TTTTTGGATT CAACCGGGGT GAGACCAGGT ATAATCTTCG CCTTTTGCCA TTGGGCGGTT TTGTTCGAAT GGCTGGGATG GACCCCAATG AAGAAGACGA TCAAGGGATA CCACTTGATC GTACTTTTAA CTTCAAAACA GCTTTACAAA GGGCATCTGT AATTATTGCA GGTCCCCTCA TGAATTTTGT TTTAGCAGTA GTTTTGTTTG CAGTCATCTT TACCCTTCAA GGGATGCCCT ATGCCACAAC AGAAGTAGGC GAGGTGATTA AAGGGTTTCC AGCTGAAAAA GCAGGTCTTA AAGTGGGGGA TCGAATTGTT GCTGTAAATG ATAACTCTGT GGAGGATTGG AACCAGTTGG TTGCAGAAAC CAATAAACAT CCTGGAGAAT CCCTTAATTT AACAATCCAA AGAGGAAAAG AACAGGTAAA ATTAACCTTA ACCACTGTCA AAGATGTGTC AGGTCAATAT AAAATTGGTA TTAAACCAAC TCAGCCACTG ATGAAAAAAC TTAATCCGCT GGCTGCTTTA GCGGCTGGAA CAAGTTTTAC AATTCAGGTG TCAGGGTTAA TTCTTTCTTT TATCGGTCAA ATGTTTACGC AACAGGCCCC TGTTGATTTA GCAGGACCCG TAGGTGTGGT TAATGAAATT GGTAAGGCAG CAGAGTTTGG TATATTTCAG GTTATGCAAT TGGCGGCATT CTTAAGTATT AATCTGGGCT TATTTAATCT CTTACCTATA CCAGCTCTGG ACGGCAGTCG GGTATTATTT TTGCTTTGGG AAAAAATAAC CGGCAGGCCA GTGGAACCAT CCAAAGAAAG CTTTATTCAT CTTATCGGTT TTGGACTATT ATTACTATTG ATGGTGGTAA TCACATATAA CGATATTGTT AATTTAATGT TTGGTAATCG TTAG
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Protein sequence | MQTFIASVAV FGLLIFFHEL GHFLVAKKVG IMVHEFSLGF GPKVFGFNRG ETRYNLRLLP LGGFVRMAGM DPNEEDDQGI PLDRTFNFKT ALQRASVIIA GPLMNFVLAV VLFAVIFTLQ GMPYATTEVG EVIKGFPAEK AGLKVGDRIV AVNDNSVEDW NQLVAETNKH PGESLNLTIQ RGKEQVKLTL TTVKDVSGQY KIGIKPTQPL MKKLNPLAAL AAGTSFTIQV SGLILSFIGQ MFTQQAPVDL AGPVGVVNEI GKAAEFGIFQ VMQLAAFLSI NLGLFNLLPI PALDGSRVLF LLWEKITGRP VEPSKESFIH LIGFGLLLLL MVVITYNDIV NLMFGNR
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