Gene Dred_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1956 
Symbol 
ID4955657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2146539 
End bp2146901 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content39% 
IMG OID640181123 
Productribosome-binding factor A 
Protein accessionYP_001113299 
Protein GI134299803 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACC GACCGGAACG TGTAGCTGAG GCTATAAAAA AAGAAGTAGC AGATTTAATC 
AGAAATGACA TAAAGGATCC AAGAATAGGT TTTGTGACAA TAACAGGTGT CGAGGTTACT
CGAGATCTAT CCTTTGCTAA AATCTTTATT AGTGTTATGG GTTCCGATGC TCACCGGCAA
GAAACATTGA GTATACTTCA AAAATCCGCT GGTTACATGC GTTCTGAAAT TGGAAGAAGG
ATTAAGCTTC GTCATGCCCC AGAATTAATA TTTAAATTAG ATACTTCACT GGATCACGGA
ACTCGAATAG CTGAAATTCT TCATGAGATA AACTCTCAGG AGGCAAAGCC AACTCATGAA
TAA
 
Protein sequence
MSHRPERVAE AIKKEVADLI RNDIKDPRIG FVTITGVEVT RDLSFAKIFI SVMGSDAHRQ 
ETLSILQKSA GYMRSEIGRR IKLRHAPELI FKLDTSLDHG TRIAEILHEI NSQEAKPTHE