| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1954 |
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| Symbol | |
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| ID | 4956091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2144641 |
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| End bp | 2145573 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640181121 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001113297 |
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| Protein GI | 134299801 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGGGG TCATCAATAT CTTAAAGCCT CCGGGAATGA CATCCCACGA TGTTGTATTC
TTTGTAAGAC GGGTTACTGG GGTGAAGAAA TGTGGGCATA CTGGTACCCT TGACCCTGGA
GCATCGGGTG TTCTCCCAGT ATGTGTAGGC AAAGCTACAC GACTAGCTAG GTTTGTTACA
GATGGAGACA AGACTTATAG GGCTGAAATA ACTCTGGGAA TTGAAACATC CAGTCAGGAT
GCCTTTGGCA ATGTTATTAG CCGCATCGAT GCATCGGCCA TAAAATTGGA TGACTTTTCC
AGTGAATTAC GCAAATTCCA GGGAGAGATT AAACAAACCC CGCCTATGGC CTCAGCCATT
AAGGTTAAGG GCAAAAAACT CTATGAACTT GAACGGGAAG GTATAATAGT AGATGTTCCT
ACTAGAACGG TTACCATATA TCAGGTGAAT ATTGTAGACA GTTGGGATTG GGGAACCCCA
AACCCCAGGG TATTGTTTGA TGTGGCTTGT TCAAAGGGGA CATATGTGCG TACCCTGTGT
TCGGATATCG GCAAGGAACT GGGTTGTGGC GCCTATATGT CCTTTTTGTT ACGTTCCCGG
GTAGCCGCCT TTGGCTTGCA CAATGCTTAT ACATTGGAGG AAATTGCAGC TTTAGCTGAC
AAAAGCCAAC TAGAGAGTGC AGTAATCCCG ATGGCTAAGG CTGTTCAGCA TTTACCCATA
GTTGAAATTC ATCCTTCTGC GCAAAAATCA GTATGCTCCG GAGCAACCCT GTATCCGGCG
GGTGTAAGAG TAGGATTAGA ATACCTAAAG CCCGAAGGTC TTGTTCAAGT TCAACTAAAT
CACGAATTGT TAGGTATTTA TAAGCCCGTT TTAGATGTAA ACGATTTTGG GGAACGCATA
ATTCTAAGAC CCGAAGTGGT TTTTGCTTCA TAA
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| Protein sequence | MDGVINILKP PGMTSHDVVF FVRRVTGVKK CGHTGTLDPG ASGVLPVCVG KATRLARFVT
DGDKTYRAEI TLGIETSSQD AFGNVISRID ASAIKLDDFS SELRKFQGEI KQTPPMASAI
KVKGKKLYEL EREGIIVDVP TRTVTIYQVN IVDSWDWGTP NPRVLFDVAC SKGTYVRTLC
SDIGKELGCG AYMSFLLRSR VAAFGLHNAY TLEEIAALAD KSQLESAVIP MAKAVQHLPI
VEIHPSAQKS VCSGATLYPA GVRVGLEYLK PEGLVQVQLN HELLGIYKPV LDVNDFGERI
ILRPEVVFAS
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