| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1950 |
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| Symbol | |
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| ID | 4955875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2140299 |
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| End bp | 2142521 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640181118 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001113294 |
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| Protein GI | 134299798 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.139447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGAAA ATCAAGTATT AATCAGGGAA ATATCCTTGG GGGGAAGAAC CCTCACTCTG
GAAACAGGTC GAATGGCCAA GCAGGCCAGT GGGGCTGTGC TGGTAACTTA TGGAGAAACT
GTTGTTCTGG TAACGGCTAC AGTGGCTAAA AACACCCGGG ATATTGATTT CTTCCCGCTA
ACAGTGGATT ATGAAGAGAG ACTCTATGCT GTTGGCAAAA TCCCCGGAGG ATTTATTAAA
AGGGAAGGTC GTCCTAGCGA AAAAGCAATC TTATCTGGTC GCTTAATTGA CCGCCCAATT
CGTCCACTTT TTCCTAAGCA CATGAGAAAC GAAGTGCAGG TAGTGGCCAC AGTAATGTCA
GTGGATCAGG ATAATGCACC TGAAATAGCT GCTATGATTG GGGCATCAGC CGCCTTACAT
ATTTCCAAAA TCCCCTTGAA AAAGCCCATT GGTGGGGTCA TTGTTGGAAG AGTGGATGGA
CAGTTTGTCA TTAATCCAAT GGTTCGCCAA GCAGAAAACA GTGATATGCA CCTTGTTGTG
GCAGGCACAG ATGATGCTGT AATGATGGTT GAGGCAGGTG CCAAAGAAGT ACCCGAGAGC
GAAATGCTTG AAGGCATTAT GTATGGACAC GAAAAAGTAA AAGAAATTGT TAAATTTATT
GAAGACTTTA GAACAGAAGC TTTGGGCATG GGATTAGCCT TTGAGAAAAT GGAGATTCCT
GAACCACAAT TTGACTCCAA TATGTCAGAA GCTATTTTAA CAATTGCTGA AGAAGCAATT
CGGGAAGCCG TTCTGCATTG TTCTAGGGAG AAGCTAACCA AAAAGCAACG AGAAGTCTAT
ATGGATGAGG TTATGTCAGG ACTGCAAGAA AAATTCTTAG AACAATTTCC TGAGAACCCT
AAAGAAGTTA CTATGTTGAT TGAAAAGGCC GAAAAGAAAG TTGTCCGTCG GATAATTACC
CATGATAAAC TTCGCATTGA TGGTAGGGCA ATCGATGAAA TCCGCCCTAT CTCAGTAGAA
GTTGGGGTAC TGCCACGTAC CCATGGAACT GGATTGTTTA CCAGAGGACA AACACAAATT
CTGTCTGTTG CTACCCTAGG GTCCATTAGT GAAGAGCAGA TATTAGATGG CCTTGGTGTT
GAAGAAAGTA AGCGTTATAT GCATCATTAT AATTTCCCAC CCTTTAGCAC CGGTGAAACA
AAGCCCATGA GATCTCCTGG CCGTCGTGAA ATTGGTCATG GTGCCTTGGC AGAAAGGGCA
CTGGAACCAA TGATACCGCC TGAAGAAGTA TTCCCATATA CCATTCGGGT GGTATCTGAA
GCCATTGAAT CAAATGGGTC TACATCAATG GGAAGTGTAT GTGGCAGTAC CCTTTCCTTA
ATGGATGCTG GTGTTCCATT AAAAGCACCT GTTGCTGGTG TAGCCATGGG GTTAATCATG
GAGGAAGATC AGTTTACTGT CCTCACTGAT ATTCAGGGCT TAGAAGACCA CTTAGGGGAT
ATGGACTTTA AAGTTGCTGG ATCCGCCAAT GGTGTTACGG CTCTCCAGAT GGATATTAAA
ATCCCTGGTA TCACCAGAGA AGTCTTTGAA CAAGCTCTGG AACAAGCCCA TCGTGGCCGG
ATGTTTATTT TAGGAAAAAT GTTGGAGGTT CTGTCTACTC CTAGAGCTGA AATCTCTGTG
CATGCTCCGG CCATTATCCG TACAAGTATC CATCCCGATA AAATCAGGGA TATCATTGGA
CCTGGTGGCA AAATTATTAA GAAATTGGTC GAAGAAACTG GTGCAGATAT TGATATCGAG
GATGATGGAA GAGTATTTAT TGCGGCTGTT GACCGAGAGA AGGGTAAACG GGCGTTGGAA
ATTATTCAGT CTATAACAGC CGAAGTTCAA GTTGGCAAGC TATACAATGG TAAAGTAACT
AGAGTAACCG ATTTTGGTTG CTTTGTAGAA GTAATTCCCG GTGTTATGGG GCTACCAGGC
AAAGAGGGAC TGGTCCATAT TTCACAGTTG GCTTTCCAAA GGGTTGAGAA AACCGAAGAT
ATTGTTAAAG AAGGGGAAGT AATAGCCGTT AAAGCCATTG GTTATGATCA ACAGGGCAGG
TTGAAACTTT CTAAAAAAGA AGCCATGAGG GATATGGGAC TGGCACCAGC CGAAAGCACT
TCAGAACAAC CAGAAAAAAG AGAACGAAGA CCTTTTAGTC GTCCAAAAGC TACCAAGGAA
TAA
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| Protein sequence | MSENQVLIRE ISLGGRTLTL ETGRMAKQAS GAVLVTYGET VVLVTATVAK NTRDIDFFPL
TVDYEERLYA VGKIPGGFIK REGRPSEKAI LSGRLIDRPI RPLFPKHMRN EVQVVATVMS
VDQDNAPEIA AMIGASAALH ISKIPLKKPI GGVIVGRVDG QFVINPMVRQ AENSDMHLVV
AGTDDAVMMV EAGAKEVPES EMLEGIMYGH EKVKEIVKFI EDFRTEALGM GLAFEKMEIP
EPQFDSNMSE AILTIAEEAI REAVLHCSRE KLTKKQREVY MDEVMSGLQE KFLEQFPENP
KEVTMLIEKA EKKVVRRIIT HDKLRIDGRA IDEIRPISVE VGVLPRTHGT GLFTRGQTQI
LSVATLGSIS EEQILDGLGV EESKRYMHHY NFPPFSTGET KPMRSPGRRE IGHGALAERA
LEPMIPPEEV FPYTIRVVSE AIESNGSTSM GSVCGSTLSL MDAGVPLKAP VAGVAMGLIM
EEDQFTVLTD IQGLEDHLGD MDFKVAGSAN GVTALQMDIK IPGITREVFE QALEQAHRGR
MFILGKMLEV LSTPRAEISV HAPAIIRTSI HPDKIRDIIG PGGKIIKKLV EETGADIDIE
DDGRVFIAAV DREKGKRALE IIQSITAEVQ VGKLYNGKVT RVTDFGCFVE VIPGVMGLPG
KEGLVHISQL AFQRVEKTED IVKEGEVIAV KAIGYDQQGR LKLSKKEAMR DMGLAPAEST
SEQPEKRERR PFSRPKATKE
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