| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1949 |
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| Symbol | |
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| ID | 4956297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2139379 |
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| End bp | 2140053 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640181117 |
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| Product | cell wall hydrolase, SleB |
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| Protein accession | YP_001113293 |
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| Protein GI | 134299797 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
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| TIGRFAM ID | [TIGR02869] spore cortex-lytic enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000201814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCTTT TTCAGGGGGA GGCAGAAGCT TATCTGGGTG ACAGAACCTT AAAACTTGGT
ATACAAGGTT ATGATGTACA ACAATTACAA AATAACCTAA ACTATCTAGG CTATAAAGCT
GGAAAAAGTG ATGGAATTTT TGGGTGGCAA ACCTACAATT CAGTAAAGCA ATTTCAGGCT
CGAAATGGAC TGAAAGTCGA TGGGGTGGTT GGTCGGGCCA CTGCCAGGAC TATGATTGCG
CAGGTTAGTG GAAATAGTGG CCAGAGGCCC AGGACGGCTT CTGTGGCCAC TGCAACTACA
TCGCGGGGTT CTCTTCCGTT GTCAAGGCAA GATATTTATG ATTTAGCAAG GGTGGTGCAT
GGTGAGGCCA GAGGAGAGTC CTTCGAGGGG CAGGTTGCAG TTGCGGCAGT GGTCTTAAAT
AGGGTACTCT CGGGTCAGTT TGGACGTACT GTTCAGGATG TGATTTTTCA ACCCTGGGCC
TTTACAGCTG TAAATGATGG ACAATTTTAC TTGCAGCCTA ATGAAGCCTC CTTTCGTGCA
GTAGAAGCGG CTATCAAAGG CTGGGATCCC ACAAGGGGTG CTATCTACTA TTGGAATCCC
AAAACTGCCA CTAGCCGGTG GATTTGGAGT AGACCTATTT CCTTGAAAAT TGGTAATCAT
GTTTTTGCTA ATTAA
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| Protein sequence | MLLFQGEAEA YLGDRTLKLG IQGYDVQQLQ NNLNYLGYKA GKSDGIFGWQ TYNSVKQFQA
RNGLKVDGVV GRATARTMIA QVSGNSGQRP RTASVATATT SRGSLPLSRQ DIYDLARVVH
GEARGESFEG QVAVAAVVLN RVLSGQFGRT VQDVIFQPWA FTAVNDGQFY LQPNEASFRA
VEAAIKGWDP TRGAIYYWNP KTATSRWIWS RPISLKIGNH VFAN
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