Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1949 |
Symbol | |
ID | 4956297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2139379 |
End bp | 2140053 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640181117 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_001113293 |
Protein GI | 134299797 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | [TIGR02869] spore cortex-lytic enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000201814 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTTT TTCAGGGGGA GGCAGAAGCT TATCTGGGTG ACAGAACCTT AAAACTTGGT ATACAAGGTT ATGATGTACA ACAATTACAA AATAACCTAA ACTATCTAGG CTATAAAGCT GGAAAAAGTG ATGGAATTTT TGGGTGGCAA ACCTACAATT CAGTAAAGCA ATTTCAGGCT CGAAATGGAC TGAAAGTCGA TGGGGTGGTT GGTCGGGCCA CTGCCAGGAC TATGATTGCG CAGGTTAGTG GAAATAGTGG CCAGAGGCCC AGGACGGCTT CTGTGGCCAC TGCAACTACA TCGCGGGGTT CTCTTCCGTT GTCAAGGCAA GATATTTATG ATTTAGCAAG GGTGGTGCAT GGTGAGGCCA GAGGAGAGTC CTTCGAGGGG CAGGTTGCAG TTGCGGCAGT GGTCTTAAAT AGGGTACTCT CGGGTCAGTT TGGACGTACT GTTCAGGATG TGATTTTTCA ACCCTGGGCC TTTACAGCTG TAAATGATGG ACAATTTTAC TTGCAGCCTA ATGAAGCCTC CTTTCGTGCA GTAGAAGCGG CTATCAAAGG CTGGGATCCC ACAAGGGGTG CTATCTACTA TTGGAATCCC AAAACTGCCA CTAGCCGGTG GATTTGGAGT AGACCTATTT CCTTGAAAAT TGGTAATCAT GTTTTTGCTA ATTAA
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Protein sequence | MLLFQGEAEA YLGDRTLKLG IQGYDVQQLQ NNLNYLGYKA GKSDGIFGWQ TYNSVKQFQA RNGLKVDGVV GRATARTMIA QVSGNSGQRP RTASVATATT SRGSLPLSRQ DIYDLARVVH GEARGESFEG QVAVAAVVLN RVLSGQFGRT VQDVIFQPWA FTAVNDGQFY LQPNEASFRA VEAAIKGWDP TRGAIYYWNP KTATSRWIWS RPISLKIGNH VFAN
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