Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1939 |
Symbol | |
ID | 4956292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2130524 |
End bp | 2131414 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640181107 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001113283 |
Protein GI | 134299787 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACAG TGGATTTTGG CAGGGTTATT ACGGCCATGG TGACACCTTT TCATCCAGAT ATGTCCGTGA ATTATACCCA GGCTAAAAAA CTAAGCAGAT ATCTGGTGGA AAATGGTTCA GATGGTTTGG TTGTTAGTGG AACCACTGGA GAATCTCCTA CCCTGAACAA GGATGAAAAG ATTCAATTAT TTAAAGCAGT GGTAGAAGAA GTTGGAGGGC AGGCAACGGT TATTGCTGGG ACCGGAAGTT ATGATACCGC CAGCAGTATT ATCCTAACCA AAGAAGCTGA AAAGGTTGGT TGTGATGGAG TTATGCTGGT GGCTCCCTAT TACAACAAAC CATCCCAGGA AGGACTCTAT CAGCATTTTC GCACTATCGC TGAATGTACC AGCTTGCCAG TAATGCTTTA CAATATTCCG GGGCGGACTG GAATTAATGT TTTGCCCGCC ACAGTGGAAA GACTGGCCAA GGATGTACCA AACATTGTGG CCATTAAAGA AGCGGCTGGG GATATCAATC AGGTATCTGA ATTACGTCGC ATCCTACCTG AGGATTTTAT CATCTTTAGC GGAGATGACT CTTTGACACT ACCAATGCTG TCCTTAGGAT GCAAGGGGAT TGTTAGTGTG GCGGCTCATA TTGCCGGTAA GCAAATACAG GAGATGATTG ATGCCTTTAC TTCTGGGAAT ACAACCCTTG CGGCTAATCT CCATAAAGAA CTTTTCCCGA TCTTTAAGGG GTTGTTTATA ACATCCAATC CAGTTCCGGT CAAAGCAGCC TTAAACCTAA AGGGGCTTGC GGTAGGTGGT GTGAGATTAC CCTTAGTTGA GGCGACGGCC AAGGAAATCG AAACTGTAAA AAATATTATG AATAACCTCC ATTTATTGTA A
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Protein sequence | MSTVDFGRVI TAMVTPFHPD MSVNYTQAKK LSRYLVENGS DGLVVSGTTG ESPTLNKDEK IQLFKAVVEE VGGQATVIAG TGSYDTASSI ILTKEAEKVG CDGVMLVAPY YNKPSQEGLY QHFRTIAECT SLPVMLYNIP GRTGINVLPA TVERLAKDVP NIVAIKEAAG DINQVSELRR ILPEDFIIFS GDDSLTLPML SLGCKGIVSV AAHIAGKQIQ EMIDAFTSGN TTLAANLHKE LFPIFKGLFI TSNPVPVKAA LNLKGLAVGG VRLPLVEATA KEIETVKNIM NNLHLL
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