Gene Dred_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1902 
Symbol 
ID4958466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2090331 
End bp2091812 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content40% 
IMG OID640181072 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001113248 
Protein GI134299752 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGTG GCAGTATAGT AAAAAAACTC TGGTTAGCAA CATCTCTATT GGTTTTATTA 
GCAATGGGCG CCTCTACATT GACACAAATG TGGTTGCTAA AGAGCACTTA TTATGATCAA
CAAATTGAGC AATTATTAGA GGCTACCAGG AAATTGGCAG TTAAAATACA AATAGACGAA
CCAATGGCAG TGGCACAGGA AATGGAGTAT TTAGCAGATA ATTTACAAGG GGCCACTGCA
TTCCTTGTTA ACAGAGATGG GCAAATTATT TATAAAACAC GTGGAGGCTG GAGCAGGGGA
CCCAAACACC AAATGGGCAT GCATGGAAAT GGTTATGGTA TGTATGGTAT ATTAACTGGT
CTAAACATGA AAGATATTCT TGCTGGTAAG GAGATTATTT TTAAAGGTCA TCATCCAATG
TTTGGTGTGG ATGTTATCAC TGTGGCGGTT CCTGTAAAAA AAGAAGAAAT CATTGGAGAA
GTGTTGGTTT TAAGCACACC ACGTCAAGCC ATTGATACGA ACATTAAGGC TTTACAGAGT
ATGAGTGTAT ACAGTCTTCT TTTTGGCCTA GTGTTAGCAA CATTGTTTAG CTGGTTACTA
TCCCGTTCAC TTTCAAGACC CTTGCTTAAA ATGAAAGACG TAGCTAATGC AATGTCCCGT
GGGGATTATA GTAGGAGTAT CAACATAAAG TCTAAAGATG AAATTGGCAT GCTAGCGGAT
TCGCTGAACA CCCTCTCCCA TGATTTGGAG GAGAAAATTA ATCAATTGAG GCGAATTGAC
GATACCCGAA GAGATTTTGT TGCAGGAGTA TCTCACGAAC TTCGAACACC GCTAACCATT
ATACAAGGAA ATGCAGAGGC TTTGCTAGAT GGGGTAATTG AAGACAAAGA TAAACAAAGG
GACTTTTTAA TTAACATATA TGAAGAGTCC TTACGGTTAA AACGGTTGTC TAACGAACTC
TTAGATATGA GAAAAATAGA GACTGGACAG GTTAACTTAT ATAAGGAAAA GGTGAATGCC
TCAGAGATAT TTTTCAATGT AGTATCCAGA ATGCAGCATC TTGCCAAGCA AAGGGGAATT
ATATTAAACC TTTCCGTGCC AGAACAACCA GTAATCCTTT ATCTGGATAC AGATCGCTTA
GGCCAAGTTT TGATCAATTT AATTGACAAT GCCCTTCGGT TCTCGCGATC AGAGGTTACC
ATTGAGCTAA AGGATTTCCC TGATAAAATT AAAGTACAAA TCAGCGATAA CGGCCCGGGT
ATCCCGGAAG CTGAAAGAAA TTTGGTATGG GATAAATTTT ATAAAGTAGA TAAGTCCCGT
TCTCGATCAG CTGGGGGGAC AGGCCTAGGC CTGTCCATTG TTAAGCAATT AATAGAACTT
CACGGTGGGA CGGTCTGCCT AACAAGCAGA GAAGGGGAAG GAACAACCTT TATATTTACC
ATTCCGAAAG AACAAGGTGG AAAATCCACA GGGCAAAACT AG
 
Protein sequence
MIGGSIVKKL WLATSLLVLL AMGASTLTQM WLLKSTYYDQ QIEQLLEATR KLAVKIQIDE 
PMAVAQEMEY LADNLQGATA FLVNRDGQII YKTRGGWSRG PKHQMGMHGN GYGMYGILTG
LNMKDILAGK EIIFKGHHPM FGVDVITVAV PVKKEEIIGE VLVLSTPRQA IDTNIKALQS
MSVYSLLFGL VLATLFSWLL SRSLSRPLLK MKDVANAMSR GDYSRSINIK SKDEIGMLAD
SLNTLSHDLE EKINQLRRID DTRRDFVAGV SHELRTPLTI IQGNAEALLD GVIEDKDKQR
DFLINIYEES LRLKRLSNEL LDMRKIETGQ VNLYKEKVNA SEIFFNVVSR MQHLAKQRGI
ILNLSVPEQP VILYLDTDRL GQVLINLIDN ALRFSRSEVT IELKDFPDKI KVQISDNGPG
IPEAERNLVW DKFYKVDKSR SRSAGGTGLG LSIVKQLIEL HGGTVCLTSR EGEGTTFIFT
IPKEQGGKST GQN