Gene Dred_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1888 
Symbol 
ID4955552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2075763 
End bp2076185 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content40% 
IMG OID640181059 
Producthypothetical protein 
Protein accessionYP_001113235 
Protein GI134299739 
COG category[S] Function unknown 
COG ID[COG3679] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000278536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACCTA GCATAAATTC TCTTATATCC TTGGGGGAGG TGAAAAATAT GAGTAATGTG 
GTTTTAGAGA GAGCTTTAGA ATTGGGTAAA CTCATTGCCC AGTCTGAGGA ATACAAAACC
ATGCGGGCAA AAGAAGCTGC TATGATGGCA GATGTTGACG CATTGGCATT AATTGAAAAA
TTTCAGCAAC TTCAACAATC TCATCAAATG TATCGTATGC AGGGGAAAGA ACTAACAGAT
GAGCAGTTAA ATGATGCCCA CGCCATGGAA GATCAGATGA TGGGTAATAA CTTGATTCGT
GAATTTGCAG AAATTCAGGA GAAATTTCAA AAATTCCTAA ATCAAGTTAA TGATCAAATC
AGTGAGGGAA TTGAAGGCCC TAAAGAGCCC CAGGGTTGTT CGAGCTGCGG CACCTTCAGT
TGA
 
Protein sequence
MVPSINSLIS LGEVKNMSNV VLERALELGK LIAQSEEYKT MRAKEAAMMA DVDALALIEK 
FQQLQQSHQM YRMQGKELTD EQLNDAHAME DQMMGNNLIR EFAEIQEKFQ KFLNQVNDQI
SEGIEGPKEP QGCSSCGTFS