| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1887 |
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| Symbol | |
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| ID | 4955906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2072897 |
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| End bp | 2075503 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640181058 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001113234 |
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| Protein GI | 134299738 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00463381 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTTAA CGCCAATGAT GCAACAGTAT TTGGATATTA AAAAGCAACA TCCCAATACT
ATTTTGTTTT TTAGATTAGG AGATTTTTAC GAAATGTTTT TCGAGGATGC CAAGCTAGCA
TCCCAGGAAC TTGAAATAAC GCTCACAGGT CGAGATGCCG GGGAACCTGA GCGAGTTCCC
ATGTGCGGTG TACCCTTTCA TGCTGCGGAT AGCTATATCA GTAAATTAAT TGAAAAGGGT
TATAAAGTTG CGATTTGTGA ACAGGTAGAG GACCCAAAGG TAACGAAGGG TATTGTTAAA
CGAGAAGTGA TTCGGGTGAT TACCCCGGGT ACTCTGATGG ACGGCAGTAT GCTAAGCGAA
AAGGATAACA ATTACTTGGT GGCCATCAGT CAGACAAGCT CTAATAATTG TGGAATGGCT
GTGGCAGATC TATCTACCGG CTTGTTTCAG GTGACAGAAA TGGAAGGCCA TTGGTCATTG
GAGAGCTTGT TGGATGAGAT CCTGCGTTTG ACTCCCCGGG AAGTATTACT AACACCGGAT
TTGAAAAAAC ACGAAAAGAC TGTTCAAGCC TTTAATTTTC TGCCGTCTAC AGTATTTACA
ACCCTAGAAG AAACTCAGCA GGTTTCAGAT TACATAGAGT TACTAAATAA TCAGTTTGGC
CAGAAAGTAA GCGCAGTATA TAAAGATAGG CCGGCTGTTT GTATGGCTGC AGGTATTTTA
TTGCAGTATT TAATTAATAC CCAAAAACGA CAATTAAATC ATATTACCGA GATCACAGCC
TATTCCCCCA GGGCTTATAT GATGCTGGAT GGCATAGCCA GACGCAACTT GGAAATTTCT
AAATCCCTCA GAGATGGAGA TAAAAGGGGA ACTCTTTTGT GGGTGCTTGA TGCAACCAAG
ACCGCCATGG GCGGGCGAAT GTTAAAGAAT TGGTTAGAGC AACCCCTTAT TGATACGTTA
AAAATTCAGG AACGCTTAGA TGCAGTGGAG GAACTGGTTA ATTCCATTCT ACTAAGGGAG
GAAATTAGCG GTGCTTTAAA ACAAATCTAT GACCTGGAGC GTCTGGCGGC TCGGGCGGCC
TATGGCAGTG CCAATGGCAG GGATATGATT GCCCTGCGAG GGTCCCTGGA GAAGCTACCT
TTTATTCATG ACGCCCTAGC AGCGGTTAGC AGCACACGGT TAAAGAGGAT CTATACAGAG
TTTAACACGC TGTCTGATTT ACGGAAAGTA TTAGACTTGG CCTTGGCTGA AAATCCACCG
GTATCCTTAA GGGATGGGGG ATTAATAAAA GATGGCTTTG ACCAGGAAGT TGACCAGCTT
AGAAACGCTG CGAGGGATGG CAAAACTTGG CTGGCGGGCT TGGAAGCCAG GGAAAAAGAG
AATACTGGTA TTAAGAACCT TAAAGTTGGT TTTAACAAGG TTTTTGGCTA TTACCTGGAG
GTTACCCGTG CAAATCTAAG TATGGTGCCA GAATACTATC AGCGCCGACA AACCTTGGCC
AATGCTGAAC GATTTATAAC ACCAGAGCTG AAGGAATATG AAAGCATGAT TCTGGGGGCA
GAGGATCGGT TGGTGGAACT AGAATACAAC CTATTTGTTG CTATTCGTGC CAAAGTTGCT
GCGGAGGTAT CCAGCATTCA AAAAACCGCG GCCCTGTTAT CAGAGATTGA TGCTTTGGTT
TCTCTGGCAG AAGTGGCAGT TAGAAATGGT TTTGTTCGTC CTGAGGTAAC AGACAACGGC
ATTATTGAGA TCAAAGATGG TCGGCACCCA GTGGTGGAAA ATACCCAGGG CCTAGGTGGG
TTTGTCCCCA ATGATACCTA TTTAGACATA AAAGAGGAAC GTTTATGTTT AATAACCGGC
CCCAATATGG GTGGCAAAAG TACCTATCAG AGACAGGTGG CATTAATTGT CTTAATGGCT
CAGGTGGGTA GTTTCGTACC TGCCCAACGT GCCCGGATTG GCATTGTGGA TCGAATCTTT
GCTCGAGTAG GTGCTTCGGA TGATCTAACT TCGGGTCAAA GTACCTTTAT GGTGGAAATG
TACGAAACCA AGCAAATAAT TGACCATGCC ACAGCCAAAA GCTTAGTTAT TATAGATGAA
CTTGGCAGGG GAACTTCCAA TCTAGAAGGG ATGGCCATTG CTCAATCGGT TATTGAATTT
TTACATGATG AAGTGGGCTG TCGTACTCTT TTTTCTACCC ATTACCATGA GTTGGCTGAA
CTGGAGGGGC TTTTGAGGGG ACTTAAAAAC TATGCCACGG CTGTAAAGGA GCAAGGAGAT
GAAGTGGTTT TCCTGCGTAA GGTGGTTCGG TCAAAGGCCA GCAAAAGCTA TGGTGTACAT
TGTGCCAGAC TGGCCGGACT ACCCACATCA ATTATCAGAA GAGCCAGTGA GTTGGTAATG
CAATTGGAAT TTCACCAAAG GGCGGCTCAG GAAGTGGTGG CAGGAAAAAC ACAGATTGCA
GCTGCCAGTG AACAATTGGC TATGTTTACA CCCCAGGAAG ACCAAGTGAA AGAAGAAATT
TTGGCCTTAA ATCTTACAAA TATGACACCG TTAGAGAGTT TGAACTTTTT AGACAATCTA
CAAAAGAGAT TGCGGGAAAT GCAATGA
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| Protein sequence | MALTPMMQQY LDIKKQHPNT ILFFRLGDFY EMFFEDAKLA SQELEITLTG RDAGEPERVP
MCGVPFHAAD SYISKLIEKG YKVAICEQVE DPKVTKGIVK REVIRVITPG TLMDGSMLSE
KDNNYLVAIS QTSSNNCGMA VADLSTGLFQ VTEMEGHWSL ESLLDEILRL TPREVLLTPD
LKKHEKTVQA FNFLPSTVFT TLEETQQVSD YIELLNNQFG QKVSAVYKDR PAVCMAAGIL
LQYLINTQKR QLNHITEITA YSPRAYMMLD GIARRNLEIS KSLRDGDKRG TLLWVLDATK
TAMGGRMLKN WLEQPLIDTL KIQERLDAVE ELVNSILLRE EISGALKQIY DLERLAARAA
YGSANGRDMI ALRGSLEKLP FIHDALAAVS STRLKRIYTE FNTLSDLRKV LDLALAENPP
VSLRDGGLIK DGFDQEVDQL RNAARDGKTW LAGLEAREKE NTGIKNLKVG FNKVFGYYLE
VTRANLSMVP EYYQRRQTLA NAERFITPEL KEYESMILGA EDRLVELEYN LFVAIRAKVA
AEVSSIQKTA ALLSEIDALV SLAEVAVRNG FVRPEVTDNG IIEIKDGRHP VVENTQGLGG
FVPNDTYLDI KEERLCLITG PNMGGKSTYQ RQVALIVLMA QVGSFVPAQR ARIGIVDRIF
ARVGASDDLT SGQSTFMVEM YETKQIIDHA TAKSLVIIDE LGRGTSNLEG MAIAQSVIEF
LHDEVGCRTL FSTHYHELAE LEGLLRGLKN YATAVKEQGD EVVFLRKVVR SKASKSYGVH
CARLAGLPTS IIRRASELVM QLEFHQRAAQ EVVAGKTQIA AASEQLAMFT PQEDQVKEEI
LALNLTNMTP LESLNFLDNL QKRLREMQ
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