| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1881 |
|---|
| Symbol | |
|---|
| ID | 4958168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2065750 |
|---|
| End bp | 2065992 |
|---|
| Gene Length | 243 bp |
|---|
| Protein Length | 80 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640181052 |
|---|
| Product | RNA chaperone Hfq |
|---|
| Protein accession | YP_001113228 |
|---|
| Protein GI | 134299732 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.318606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAC CCCAGATAAA TTTACAAGAT GCCTTTCTGA ATCAAGTTAG AAAGGAAAAT
ATCCCTGTTA CCATTTTCCT TATTAATGGT TTTCAATTAA AAGGAATGGT TAAGGGTTTT
GATAATTTTA CTGTTATTTT GGAAAGTGAC GGGAAGCAAC TGATGGTATA CAAACATGCC
ATTTCTACCA TTAGCCCGCT TCGTCCTGTT AATACCTCCT TTTCGGAAAA TAAACCGATA
TAA
|
|---|
| Protein sequence | MTKPQINLQD AFLNQVRKEN IPVTIFLING FQLKGMVKGF DNFTVILESD GKQLMVYKHA
ISTISPLRPV NTSFSENKPI
|
|---|
| |