Gene Dred_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1880 
Symbol 
ID4958162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2064686 
End bp2065642 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content41% 
IMG OID640181051 
ProductATPase central domain-containing protein 
Protein accessionYP_001113227 
Protein GI134299731 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID[TIGR02880] probable Rubsico expression protein CbbX
[TIGR02881] stage V sporulation protein K 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00868854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAAAA TTAGTATGTG GAAATATCCG CCTAGGTTTG AACCGCCAAA GCAGGTTGGT 
ATGATAAAAA AACCTTCTTT ACCAACCAGG CAATCAGTCC AACAGGAGAA ATCACAGTTA 
CTGGAAGAAA TAGACCGCAA AGCGACCCAA GAGATTTTGG GAGAATTGGA CCAGTTAATC 
GGCCTTGATA GTGTTAAAAA ACTAGTTAGG GAAATTCAAG CCTTTGTGGA GATTCAAAGG 
CTTAGACAAA AAGAAAAGTT AATTTTTGAA CCCATGGTAC TGCATATGAT TTTCAAGGGT 
AATCCTGGTA CAGGAAAAAC CACTGTGGCC AGGATTATTG GTCGACTCTT TAAAGAAATG 
GCCGTTTTGC CGAAGGGACA TCTAATTGAG GTTGAGCGGG CTGACTTGGT TGGTGAATAC 
ATCGGTCATA CGGCGGCGAA AACCCGTGAT CAAATAAAAA AAGCCATCGG CGGTATTCTT 
TTTATTGATG AAGCCTACTC ATTAGCCAGA GGCGGCGAAA AGGATTTCGG CAAGGAAGCC 
ATTGATTCTA TGGTAACAAG TATGGAAAAC AATAAGGATA ATTTAATTAT TATCCTGGCG 
GGTTATCAAG ATGAAATGGA CTACTTTATG GAAACCAATC CCGGTTTGCG TTCACGTTTC 
CCAATACATA TTACCTTCCC AGACTATTCC ATTGATCAAC TAATGGATAT TGCTGACCTT 
ATGTTAAAAC AGCGCCAATA TGTATTGGCT CCAATGGCCA GGGAGGAATT ATATAAGATT 
GTTGCGCAGC AGACTCGTAA ACACGAGCAT AGTGGCAATG CCAGGTTAGT TCGTAACTTA 
ATAGAGAGGG CCATGCGAAT GCAGGCTGTT CGATTAATAG CAAGAAAAAA AATAACCAGG 
CAGGACCTAA TGGCTATCAA TAAAGAAGAC TTGACAGAGG CTCTGGAGGG AATATAA
 
Protein sequence
MVKISMWKYP PRFEPPKQVG MIKKPSLPTR QSVQQEKSQL LEEIDRKATQ EILGELDQLI 
GLDSVKKLVR EIQAFVEIQR LRQKEKLIFE PMVLHMIFKG NPGTGKTTVA RIIGRLFKEM 
AVLPKGHLIE VERADLVGEY IGHTAAKTRD QIKKAIGGIL FIDEAYSLAR GGEKDFGKEA 
IDSMVTSMEN NKDNLIIILA GYQDEMDYFM ETNPGLRSRF PIHITFPDYS IDQLMDIADL 
MLKQRQYVLA PMAREELYKI VAQQTRKHEH SGNARLVRNL IERAMRMQAV RLIARKKITR 
QDLMAINKED LTEALEGI