Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1868 |
Symbol | sdhB |
ID | 4955587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2053905 |
End bp | 2054651 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640181041 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001113217 |
Protein GI | 134299721 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00129853 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA TGGTGTCCTT AAAGATTAAA CGTCAGTCTG ATGTATCCAC AGCGGCTTAT TGGGAAGAAT TTATGATTCC ATATAAAGAA AAAATGAATG TTATATCTCT TTTAAAGGAG ATTCAAAAGA ACCCAGTGAA TGCCAAGGGA GAAGCAACAA CACCCGTGGT TTGGGAGTGC AACTGTTTAG AAGAAGTATG CGGCGCTTGT ACCATGCTTA TTAATGGAAA AGCACGGCAG GCATGTTCGG CTCTGGTTGA CCAGCTTCAG CAACCCATTG TATTAGAACC CTTAAGTAAA TTCCCCCTTG TGCGTGATTT AATGGTTGAT CGTTCTATTA TGTTTGATCA TTTAAAGAAG GTTAAGGCAT GGATTCCCAT TGATGGAACA TACGACCTTG GTCCGGGACT CCGTATGGCT CAAAGGGTTC AGGAAGACTC CTACCCCATT TCCCGCTGCA TGACCTGTGG CTGTTGTTTG GAAGCTTGCC CCAATGTTAA TAGCAAATCA AAATTTATTG GACCAGCTCC GTTGGCCCAA GTTAAACTGT TTAACTCTCA CCCCACTGGT GCCATGAACC AAGAAGAAAG ACTGGATGCC ATCATGGGAG TGGGTGGTAT CACAGACTGT GGGAATGCAC AGAATTGTGT AAAGGTATGT CCTAAACAAA TCCCGCTGGC TAAAACCATT GCGCAACTAA ATAGAGATAC AACAATACAT GGTATAAAAA GATGGTTAGG CAGGTAA
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Protein sequence | MSKMVSLKIK RQSDVSTAAY WEEFMIPYKE KMNVISLLKE IQKNPVNAKG EATTPVVWEC NCLEEVCGAC TMLINGKARQ ACSALVDQLQ QPIVLEPLSK FPLVRDLMVD RSIMFDHLKK VKAWIPIDGT YDLGPGLRMA QRVQEDSYPI SRCMTCGCCL EACPNVNSKS KFIGPAPLAQ VKLFNSHPTG AMNQEERLDA IMGVGGITDC GNAQNCVKVC PKQIPLAKTI AQLNRDTTIH GIKRWLGR
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