| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1863 |
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| Symbol | |
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| ID | 4956040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 2047634 |
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| End bp | 2049277 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640181036 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001113212 |
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| Protein GI | 134299716 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATCA ATAAAAAATT GTTAAATGTT TTTGTGCTTT TGCTGGCAAT TACTTTTTTA
AATTCCGTTT TTTTATTTAA GAAATTTAGT GATACCTATG GACAAATTGA TAAAATACAG
TCATTCCAAA AACAATTGAC AACCTTTGAT GAATTATTTT TGGATATTGA TGCTATGGCT
ACCAATCTTC AAGATTATAT TGTATTGAGA GATCATAAGT ATTTAGAAAA TTATTATAGG
GAGAGTTCAT ACATTGTTAA AAAGCAAACA GAATTATATA ATTCTCCTAC CCTATCGAAA
AATCAGGATG TATTACAATT AATGGAGTTA AGCAAGTCCT ACATGTCCTT TGCTTCTCTC
GAAGTCATTC AGGTATTGCA AACCAATAAT TTCTCTCGGG CTAATACCGA ATATTTATAT
ACGAGAAATA AGGAGTTAAC CAATGAAATA ATAAATAAAC TAAACAGTAT TAAAAAGGAT
AATGACAACC AGATAAGTAA GTACTTTCAT AACACAATTT TAAATATTGA TAATAAAATT
ATCCTGTTGC TGTTTATTCT TTTCTCTTCA CTACTACTTT TACCTTACCT TTTATATTTA
ATGTTTAAGC CTTCTTTAAC TAAATGTGTT TATACAAGTG AGTTAGCAGA GTATTCCAAC
GATGCGGTTA TGTTTATCGA TAGTATTGGA AATGTAAAAT ATGTTAATAA ATCAGCACAG
GATTTATTTG GTTTACTACC TGAAAATGTC GTTAGCAAAA ATGTTCAACA ATTTCCTAAG
CTTTTTCCAC GGCTACAAAA TGTAATTCAA CCATTATTTC ACTCCCTGAT GCATCAAAAA
GAATCATTAA AAAATAAGGT TACCTTCAAA AACGATGGCA GATCCATTGA CTTAACCGTG
GATTATATTT CTATTAATTT ATTTAATCGT TTTATTGGTG TCATGATGGT TTCTAGATGT
GCCAGCAGAC AAAATGGTAA GCCACTTTTA TTAGACACTT TGGAAAAGGA AAGAAAAAGG
ATATCCATAG AAATACATGA TTGGATTGCT CGCTATATGT CAACCATTAT CCATTCCCTC
GATTATAATC TTCGTTTGCA TAAAAACGGC AATTTGAAGG GGGATCAATT GATGCATAAT
CTTAATGATC TCCGAAACCA TTGTCAAAAT GCAGCCATTG AAATGAGGGG GATCATGAAT
GATATTCACC CTTACCTTAT TGATAAAGTT GGACTGATTT CCGCTTTGGA ATCCTATATT
AATACCTTTG AAAAGTTAAA TAATATTAAA GTGTACATTT TTTATCATGA CCGGGCCCTC
AAGCTCAAAA AGAAAGACGA AATTATCATT TATCGTATTA TTCAGGAAGC ACTGAGTAAC
ATAGTTAAAC ATGCCAGGGC ATCTGAAGTC GATATTAATT TTACAAAAGA GCACGACACA
TTAAAAATTG AAATCATGGA TAATGGCGGT ACAGAAGGTG ACTTTGTGGC AGGAAAAGGC
CTTTGGGGTA TGAAAGAACG TGCAAACCTA ATGGGGGGAG ATATTGTATT TGGTTTCTGC
GAGACAGGAT TTTGTGTCAC CTTAAGTGTT CCTATTCTAT CAGGAGGCCA AAATGATGGA
GAAAATCAAA ATAATGCTGA TTGA
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| Protein sequence | MTINKKLLNV FVLLLAITFL NSVFLFKKFS DTYGQIDKIQ SFQKQLTTFD ELFLDIDAMA
TNLQDYIVLR DHKYLENYYR ESSYIVKKQT ELYNSPTLSK NQDVLQLMEL SKSYMSFASL
EVIQVLQTNN FSRANTEYLY TRNKELTNEI INKLNSIKKD NDNQISKYFH NTILNIDNKI
ILLLFILFSS LLLLPYLLYL MFKPSLTKCV YTSELAEYSN DAVMFIDSIG NVKYVNKSAQ
DLFGLLPENV VSKNVQQFPK LFPRLQNVIQ PLFHSLMHQK ESLKNKVTFK NDGRSIDLTV
DYISINLFNR FIGVMMVSRC ASRQNGKPLL LDTLEKERKR ISIEIHDWIA RYMSTIIHSL
DYNLRLHKNG NLKGDQLMHN LNDLRNHCQN AAIEMRGIMN DIHPYLIDKV GLISALESYI
NTFEKLNNIK VYIFYHDRAL KLKKKDEIII YRIIQEALSN IVKHARASEV DINFTKEHDT
LKIEIMDNGG TEGDFVAGKG LWGMKERANL MGGDIVFGFC ETGFCVTLSV PILSGGQNDG
ENQNNAD
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