| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1857 |
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| Symbol | |
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| ID | 4955252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2040142 |
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| End bp | 2041944 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640181030 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001113206 |
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| Protein GI | 134299710 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
[COG3411] Ferredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAACA TTGATAATAA TACTCCTAAA GTGGTTTGTA TTTGCGCTGG TGGTTGCACT
TCCTCCGGTT CCTTGAAAAT ATTAGAACGT TTTCAAACTG AGATAGAACA AAGGGGACTG
GCAGATAAAA TTGTGGTTAA GCCTGTGGGG TGCCATGGCT TTTGTGAACA GGGACCTATT
GTTACGGTTG AACCAGAAAA ATTATTTTAT ACCCGAGTTA GCGAGAATGA TGTACCTGCC
CTTGTAGTAT CTATAGCGAA AGGGTCACCA GTGGATCGGC TTTTATATAT AAATCCGGAG
AATAACCAAA GAGTCACCAA TTATGAACGC GTTCCCTTTT ATGCCCGCCA GCAGAAAATT
GTCTTAGCAA AATGCGGTAA GATTAATCCG GAAAGGATTG AGGACTATCT TGTCCTAGGA
GGCTACCGGG CTATGAAAAA GGTATTAACA ATCATGACAC CACAAGCGGT GGTAGATGAA
GTGAAAAGCT CGGGTCTTCG GGGCCGCGGT GGTGCAGGAT TTCCCACTGG TACAAAGTGG
GAAGGTGCCC TTCATGCCAA GATTAAAGAT AAAAAATACG TGATTTGCAA TGCAGATGAA
GGTGACCCTG GTGCTTTTAT GGATCGCAGC ATATTAGAGG GGAATCCCCA TGAAGTCCTG
GAAGGGATGA TTATCTGTGG TTATGCCACT GGTTCGGATG AGGGATATAT ATATGTGCGG
GCGGAATACC CCATGGCCAT TCGAAGATTA AAGATTGCTA TTTCTCAGGC TGAAGCCGCA
GGTTACCTAG GGAATAACAT TCTTAATTCT GGCTTTAACT TTCACATTAA AATTAAAGCC
GGTGCAGGGG CCTTTGTCTG TGGTGAGGGA ACTGCCCTGA TGGCTTCCAT AGAAGGCAAC
CGGGGGATGC CACGATTCAA AGCAAGTCGA TCCACCGAGA AGGGTCTTTG GGATAAACCA
ACAACAATGA ATAATGTTGA AACCTTTGCC AACATTCCAA CCATTATTGT CAAGGGAGCT
TTATGGTATA GCTCCATCGG TACGGATAAT AGTAAAGGAA CCAAAGTGTT TTCGTTAACT
GGTAAAGTTG TTAATACAGG TTTAGTGGAA GTGCCGATGG GAACTAGCCT CCGCCAAATT
ATATTTGATA TCGGTGGTGG GATACCAAAT AATAGAAAAT TTAAAGCTGT ACAATCCGGG
GGACCGTCTG GAGGATGTAT TCCGGCAAAA TACCTGGATT TGCCTGTGGA CTATAATTCC
CTGGGAAAGG TCGGAGCAAT GATGGGCTCG GGCGGCCTTG TCGTTATGGA TGATACCACC
TGCATGGTGG ATGTTGCACG GTTTTTCTTA AACTTTACCA AGAATGAATC CTGCGGCAAA
TGTACGCCCT GTCGTGAAGG TACCCTGCGT ATGTTGGAAA TCCTTACTCG TATCTGTGAA
GGGAAAGGGG AACCCAAGGA TATCGATGAC CTAGAACGAT TAGCAAAGGT TATCTGTGGT
ACATCACTGT GTGGACTTGG CCAAAGTGCA CCTTTCCCGG TCCTTAGCAC TCTGCGCTAC
TTCCGGCATG AATATGAAGA GCATATTTAC AATAAACGTT GTCCAGCCGG TGTTTGTCCC
AATCTACTGG TTTATACCAT CGATAGGGAA AAATGCATTG GGTGTGGTAT TTGTGCCCGC
TCCTGTCCTG TTGGAGCCAT TGACGGGGAG AAAAAACAAC CACATTCCAT AGATATCAAA
GCTTGCATAA AATGTGGCAA TTGCCTGCAA AAATGTAAAT TTGGTGCAGT TCAAAAGAGG
TAG
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| Protein sequence | MKNIDNNTPK VVCICAGGCT SSGSLKILER FQTEIEQRGL ADKIVVKPVG CHGFCEQGPI
VTVEPEKLFY TRVSENDVPA LVVSIAKGSP VDRLLYINPE NNQRVTNYER VPFYARQQKI
VLAKCGKINP ERIEDYLVLG GYRAMKKVLT IMTPQAVVDE VKSSGLRGRG GAGFPTGTKW
EGALHAKIKD KKYVICNADE GDPGAFMDRS ILEGNPHEVL EGMIICGYAT GSDEGYIYVR
AEYPMAIRRL KIAISQAEAA GYLGNNILNS GFNFHIKIKA GAGAFVCGEG TALMASIEGN
RGMPRFKASR STEKGLWDKP TTMNNVETFA NIPTIIVKGA LWYSSIGTDN SKGTKVFSLT
GKVVNTGLVE VPMGTSLRQI IFDIGGGIPN NRKFKAVQSG GPSGGCIPAK YLDLPVDYNS
LGKVGAMMGS GGLVVMDDTT CMVDVARFFL NFTKNESCGK CTPCREGTLR MLEILTRICE
GKGEPKDIDD LERLAKVICG TSLCGLGQSA PFPVLSTLRY FRHEYEEHIY NKRCPAGVCP
NLLVYTIDRE KCIGCGICAR SCPVGAIDGE KKQPHSIDIK ACIKCGNCLQ KCKFGAVQKR
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