| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1840 |
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| Symbol | |
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| ID | 4955957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2019042 |
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| End bp | 2020664 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640181014 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001113190 |
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| Protein GI | 134299694 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGCC ACTATGAACA AGTGTTTCAA AATGAAATGC AACTTCTCCT GACGTGTCAA
AAAGATCTTA ATAACCCAGC TTATAAGGAC AGTGTTTTAC TACCCAAGTA TAAAGAACTG
ATATTGGAGT ATGAAAAGCT TCTAAAAGTC TCTAAAAAAA TTTTTAAGAT AAGTGACACC
CAAGGAAGGG TATTAAAGAA ACGTGAATAC GAGATTAAAA ATTTACTGGA TAACGCAAAT
CAAGGTTTCT TAACCTGTGG GAAAGATTTA ATAGTAGATA AGGAATACAG TGCGGAGTGT
ATTCGGATTT TTTGTAGAAA AATTTGCAAT TTAAATATAG TTGATTTGTT AATTGATACT
GGGAGTGATT TCCCTACCAG AATACAAATT GAGAAAACTT TATCATCCAT CTTTAATTCC
AATGACGTTG AAGAAAAAGA TTCTCTTCTA AGCAAACTTC CCCATACACT GTTTATCAAT
GATAAAAATA TCAATGTTGA ATACAAGCTT ATCGGCCAGG AGGATAATCA CGAGGAGATC
CTGTTTCTAA TTCTTACGGA CGTCACCGAA AAAATTAAGT CAGATGCTCA GATAGAATAT
TTAAGCTTTT ATGACAGTCT TACAAGTTTA TATAACCGGG CCTACATCGA CAGAGTGATT
CCTGAGATGC TTCATCCCGA GAATCTTCCC TTTAGCATTA TTCTGGCAGA TATAAACGGC
CTAAAGTTAA TTAATGATGT TTTTGGACAT GAAAAAGGTG ATCAACTAAT TATTGATACA
GCCAATGTAT TGAAAAAGAG CTGTCGCAAA ACAGACGTCG TGGCCCGCTG GGGTGGGGAT
GAATTTCTCA TTATTCTCCC CAACACCAAC GAGAAGTTTT GTCAGGAGGT TGTCACTAGG
ATTAATAATC TTTGCCAGCA TTCCGGGAGG AATCCTATTG CCATTAGTGT GGCAATGGGA
ACGGCAACGG TAGATTCTTT AGATACTAAT TTCTGTAAGA TCTTTGGCCA GGCAGAAAAT
AAAATGTACA AAAATAAATT ACTGGAAAGC AAGGCTGTTC GCCATAAGAT CATCATGAAT
ATTGAAAAAG TACAGCAAGA GCGAGGTTTT GAAACCCAGG GACATGTTGA GAGAGTAAGG
GATATGGCCG TAAAGTTTGC TAAATTAGTG GGTGTTAAGG CAGGCTCGCC GGAAATGAAC
CATCTTATGC TATTAGTATC CCTCCATGAT GTTGGTAAGG TTGCAATTCC CGAAGAAATA
CTTTTAAAGC CCAGTAGTCT AATACACGAA GAGTGGGAAA TCATAAAGTC ACATAGTGAA
ATTGGTTATA GAATGGCTCA GTCCATAGGC GAAGCTGTTG CTGCCGAAGC GATTTTGGCC
TTGCGAGAAC GCTGGGATGG TAATGGTTAC CCCAGAGGGT TAAAGGGGGA AGAAATCCCT
TATATGGCCA GATTGTTGGC AATTGTGGAT TCCTTTGATG TCATGACACA CGATAGGATT
TATAAGCGTT CCATTAGTGT GGAAGAAGCC AAAAGAGAGG TTTTACAAAA CAGCGGAACA
CAATTTGACC CGTTTCTGAC AAAAACCTTC TTAGAAAAAT TTATTAATAT ATATGAACAA
TAA
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| Protein sequence | MRGHYEQVFQ NEMQLLLTCQ KDLNNPAYKD SVLLPKYKEL ILEYEKLLKV SKKIFKISDT
QGRVLKKREY EIKNLLDNAN QGFLTCGKDL IVDKEYSAEC IRIFCRKICN LNIVDLLIDT
GSDFPTRIQI EKTLSSIFNS NDVEEKDSLL SKLPHTLFIN DKNINVEYKL IGQEDNHEEI
LFLILTDVTE KIKSDAQIEY LSFYDSLTSL YNRAYIDRVI PEMLHPENLP FSIILADING
LKLINDVFGH EKGDQLIIDT ANVLKKSCRK TDVVARWGGD EFLIILPNTN EKFCQEVVTR
INNLCQHSGR NPIAISVAMG TATVDSLDTN FCKIFGQAEN KMYKNKLLES KAVRHKIIMN
IEKVQQERGF ETQGHVERVR DMAVKFAKLV GVKAGSPEMN HLMLLVSLHD VGKVAIPEEI
LLKPSSLIHE EWEIIKSHSE IGYRMAQSIG EAVAAEAILA LRERWDGNGY PRGLKGEEIP
YMARLLAIVD SFDVMTHDRI YKRSISVEEA KREVLQNSGT QFDPFLTKTF LEKFINIYEQ
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