Gene Dred_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1832 
Symbol 
ID4957886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp2012265 
End bp2012897 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content35% 
IMG OID640181006 
Productregulatory protein RecX 
Protein accessionYP_001113182 
Protein GI134299686 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000237613 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTG TTACAGCTCT AGAAGTGCAG AAAAAGAACA ACCAAAGATA TAGTCTCTTT 
CTTGATGGCA AATATGCCTT CGGTGTCCAT GAGGACACTC TTATTCAATT TCAATTGTTT 
AATATCATTG GCAAAGAACT GCCTGACTAT ATTATTCAGC AAATTATCCG GGCAGAAAAC 
AAACACCAGA TCATCAGTTA TGCGATATCA CTTCTCTCCT ACCGCGCCAG AAGTAGCCAT 
GAGTTAAGAA CCCGAATGAG GGATAAGGGA TATCAAGTTG CTGTTGTTGA GGAAACCATC 
GAAACGTTAC AAAGACTGGG ATACATTGAT GATATTGAAT TTGCTAAGGT TTTTATAAAT 
GATCGGCAAC GATTAAAAAA GGTCGGCAAA AAATTAATTC GACAAGAACT TTGGCAAAAA 
GGTATATCCA AAGATATCAT TAATGATCTT CTTGAACAAG CAACCGATGA TGAGCAGGAA 
TATCAAAGGG CTAAAACTCT CGCCATAAAG AAAATAACAT CTTATAGAAA AGATGATGAA 
CGGACTAAAC AGAGAAAATT GTATAGCTAT CTTATCAGAA AAGGATATTC ATTTAGCATA 
GCATCTTCTG TTATTAAAGA ACTTTTTTCT TGA
 
Protein sequence
MSIVTALEVQ KKNNQRYSLF LDGKYAFGVH EDTLIQFQLF NIIGKELPDY IIQQIIRAEN 
KHQIISYAIS LLSYRARSSH ELRTRMRDKG YQVAVVEETI ETLQRLGYID DIEFAKVFIN 
DRQRLKKVGK KLIRQELWQK GISKDIINDL LEQATDDEQE YQRAKTLAIK KITSYRKDDE 
RTKQRKLYSY LIRKGYSFSI ASSVIKELFS