Gene Dred_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1817 
Symbol 
ID4957556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1993603 
End bp1995378 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content37% 
IMG OID640180991 
Producthypothetical protein 
Protein accessionYP_001113167 
Protein GI134299671 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000172798 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTA TTCAATCCGA AGACTTTTCT CTGAATAAAT TACTTCAGGA CTACTATATG 
GTTCCCAGCT ATCAAAGGGA ATACGTTTGG CAACCCAAAC AGGTAAATCA ACTGCTAGAA
GATGTATTAG AAGCCAAGGG TGATTTCCCA AAATCCGAGG GGAATGAATA CTTTATTGGA
AGTATTGTGG TTTGCGAATC AAAACATGCT GATAAACAGA GTGTACTTGA GGTTATTGAT
GGCCAACAAA GGTTGACAAC CATCATAATT ATCCTTTGTG CAATAAGGGA TCGTATCAAA
GATATTAACC AAAACGCTGA TGTCTCAGCC GTTAATAAAT ATATTATAAA TTCAAATATT
GATTTTTATG GTAACGCCGT TGAAACAATG AAACTTTCTC TTCAGTACGA AGAAAGCGAA
GGTATCCTCG AAAAATTAGG CAAGGGTTTA AATGAAAGCA AAATACAAAG TACATCCAAT
TCTGTTAACA ATATTATTAA TGCTTATTTT TCTGCCAAGG AATTTTTAAG TCAAAATTTT
TCCAGTGACG AAATGGGCGT AAGGGGTTAT TTTGGCTACC TCATTAACAA AGTAAAAGTA
ATACGAGTTC AGACCCTAAG TGTTGCTCAG GCATTGAAAA TTTTTGAAAC CATTAACGAT
CGAGGCGTCG GTCTCAATTC CATGGACTTA TTAAAGAACT TAATGTTTAT GCATGTGAAA
GCAGGCGAAT TTGATAGACT AAAAGATAAG TGGAAAAGCA TTGTTGTTGA GTTAGAACGC
CAAAAAGAAA AACCTCTGCG ATTTTTGAGA TATTACATCA TGGGTAATTT TGGTGTTGAA
GAAATTACTG AAGATAGAAT TTACGATTGG TTTATCCAAA ATGAAGACAA ATGCGGCTAC
AAAAAAGACC CCTTTACTTT TGTTAACCAG TTAACAGAAA ATGTTAGGGC CTATGGACAA
TACATGGCTG GAAAAAACCC CGATGGAACA CCCAATCGTT ATCTGGATAA TCTAAGATAT
TTTTGTGGCG CAGCCAGACA GCATTTAATT CTCTTATTAG CTGCTCGAAA ACTGGAACCA
GCATTATTGG AGAAACTTAG CCGTCAAATC GAAAACTTAT TCTTTTGTTA TATCATCACT
CGGGAGCCTA CCAAAACCTT TGAGAAGAAA TTTGCTAGGT GGTCCTTGGA TTTACTTAAA
ATCAAGACCG AAGTTGAGCT GGACGACTTC CTAAACAAAT ATATCGAAAC GGAAAAGAAA
AAAAAGAAGT CCAGTTTCGA ACACGACCTT GGTGTTTTAA CTCAATATGA TATTCAGCAG
TATCGGATCC GCTATATTCT GGCTAAACTT ACCCAATCCT TGGACGAAAA AGCCTGGGGA
TCAAGTCCTG CATTAATTAG TCTGGATGCC TATCTCCATA AAGGTGTAGA TATTGAACAT
ATCTTGCCCC AAAACCCATC AGCAATGGTA AAATCATCCT TTGATCTACC CGATCAATAC
CAAAGTTATA TCGGTCGGCT GGGTAATCTA ACATTGCTGG AAAAATCCAT TAATGCCTCT
GTATCCAACG GTTTATATCA GGAAAAAAGA AAGTCCTATG AAAAGAGTCA TTTTGTATTA
ACCCAAGCCA TATCTAAAAA GCCCCAAATT GGTATTAACA CTCAAATCAA TCGAGCTGTT
TGCATACTGC GCTCTTATGA CCAATGGACT TCAAAAGATA TTGAAGATCG CCAAAAATTA
CTGGTAGAAT TGGCTTTGAA TGCTTGGGAT ATGTAG
 
Protein sequence
MNTIQSEDFS LNKLLQDYYM VPSYQREYVW QPKQVNQLLE DVLEAKGDFP KSEGNEYFIG 
SIVVCESKHA DKQSVLEVID GQQRLTTIII ILCAIRDRIK DINQNADVSA VNKYIINSNI
DFYGNAVETM KLSLQYEESE GILEKLGKGL NESKIQSTSN SVNNIINAYF SAKEFLSQNF
SSDEMGVRGY FGYLINKVKV IRVQTLSVAQ ALKIFETIND RGVGLNSMDL LKNLMFMHVK
AGEFDRLKDK WKSIVVELER QKEKPLRFLR YYIMGNFGVE EITEDRIYDW FIQNEDKCGY
KKDPFTFVNQ LTENVRAYGQ YMAGKNPDGT PNRYLDNLRY FCGAARQHLI LLLAARKLEP
ALLEKLSRQI ENLFFCYIIT REPTKTFEKK FARWSLDLLK IKTEVELDDF LNKYIETEKK
KKKSSFEHDL GVLTQYDIQQ YRIRYILAKL TQSLDEKAWG SSPALISLDA YLHKGVDIEH
ILPQNPSAMV KSSFDLPDQY QSYIGRLGNL TLLEKSINAS VSNGLYQEKR KSYEKSHFVL
TQAISKKPQI GINTQINRAV CILRSYDQWT SKDIEDRQKL LVELALNAWD M