Gene Dred_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1800 
Symbol 
ID4957082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1974803 
End bp1975975 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content39% 
IMG OID640180974 
Productglycosyl transferase, group 1 
Protein accessionYP_001113150 
Protein GI134299654 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCG GTATATTTAC TGACAGCTAC AAACCCTATA TTAGCGGAGT TGTACGATCC 
ATAGAGCTTT TTACATCAGA ATTTGAACAG ATGGGACACG AGGTAATTAT TTTTTCCCCC
AACTATCCGG GGGTAGAAAA AGAAAAGAAT GTCTATCGAT TTCCCTCGGT GCCGTCTCTG
GCCCATGATG ATTTTTACCT TGCCCTGCCT TTTTCATGGG GCTTAAAAAA CTTCATTAAA
GAGAAACCCC TTGACATTGT ACATGTTCAT TCACCCTTTA TTCTGGGTCG GCTAGGTGCC
AGGTTAGCAA AAAGAATGGG TATTCCATTA GTTTTTACCT ATCATACGTT ATATGACCAA
TATACCCATT ACGTACCCTT GGGTAAAGAT TTTAGCAAAC AAATTACCCG TAAAATGTGT
GTGAATTTTT GCAACCGTTG CCATTTAGTA ATCACACCAA CTGAAATAAT ATCTCATCAT
ATCAAAAACA TGGGGGTAAC ATCTCCGGTT AACTGGTTAC CCACCGGGAT TGATCTATCT
GAATTTTCCA ACTCAGATAG GCACTGGCTT AAAAATACTT ATAAAATAAA CCCCCATGAT
ATTGTAATGC TCTTTGTGGG TCGGGCCGGC AAGGAAAAGA ATATCCCCTT TATAATTAAA
AGTTTTTCAC TGGTTCATAA ACAACATCCC CACACTAAAT TATTCCTAGT AGGAGAGGGT
CCTGAATTAG ATAACTTGAA AAACCTCGTC AAAAGCCTTC AGCTAGAGGA TAGTGTAATA
TGGACCGGCA AACTACAACG TGAGGAATTA ATAAAAGCCT ACTGTGGGGC GGATCTGTTT
GTATTTGGTT CCTTAACAGA AACCCAGGGA TTGGTCATCG CAGAAGCAAA GGCAGCCGGT
TTACCAGTAA TTGCGGTAGA TGCCTTCGGT GTATCCAATA TGGTCTCTCA TGAAGAAGAT
GGGTTTTTAG TACAACCAGA TATCCAAATG TTTTACCAAA AAATAACACA GCTAATAAAC
AATCCAGATT TAAGGAGAAA GATGAGTACA AATGCTCTCC GTAATGTACA AAAAATATCT
TCCCATCAAT GTGCCAAAAA GCTAGAAAAC TACTATAATG AGCTTAAAAT TAAAGCCATG
GTTGAAAAAC AAAGGAAAGA AGCTTTGCTA TAA
 
Protein sequence
MRIGIFTDSY KPYISGVVRS IELFTSEFEQ MGHEVIIFSP NYPGVEKEKN VYRFPSVPSL 
AHDDFYLALP FSWGLKNFIK EKPLDIVHVH SPFILGRLGA RLAKRMGIPL VFTYHTLYDQ
YTHYVPLGKD FSKQITRKMC VNFCNRCHLV ITPTEIISHH IKNMGVTSPV NWLPTGIDLS
EFSNSDRHWL KNTYKINPHD IVMLFVGRAG KEKNIPFIIK SFSLVHKQHP HTKLFLVGEG
PELDNLKNLV KSLQLEDSVI WTGKLQREEL IKAYCGADLF VFGSLTETQG LVIAEAKAAG
LPVIAVDAFG VSNMVSHEED GFLVQPDIQM FYQKITQLIN NPDLRRKMST NALRNVQKIS
SHQCAKKLEN YYNELKIKAM VEKQRKEALL