Gene Dred_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1781 
Symbol 
ID4955930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1951361 
End bp1952143 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content43% 
IMG OID640180954 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001113131 
Protein GI134299635 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.655694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGGA ATACCATTCT CCTTGAAAAA GAAGGCAATA TTGCTTTGTT GACCATCAAT 
CGTCCCAAAG CATTAAATGC CCTAAATCCC GAAGTTCTTA CCGAATTAGG GCAAGCTGTT
GACGCAATTA GTGCGGATGA TGAAATATTT GTCGTAATCC TAAAAGGTGC TGGAGAAAAG
GCTTTTGTGG CTGGTGCAGA TATTACAGCA ATGAAAGATA TGACAGCCCT CGAGGGCCGG
AACTTTGGTC AACTGGGACA AGAAGTATTC AAAAAACTAG AATATATGCC AAAACCAATC
ATTGCGGCCA TTAACGGCTT TGCTCTGGGC GGAGGTTGTG AATTGGCTAT GGCTTGTGAT
ATCCGTGTAG CCTCTGAAAA AAGTAAGTTT GGGCAACCGG AAGTTGGGTT AGGCATCACC
CCTGGATTTG CCGGAACCCA AAGATTGCCT CGTTTAGTAG GAAAAGGTCG TGCCAAAGAA
CTGATCTATA CAGCCGATAT TATCGGGGCT GCAGATGCTC ATCGTATTGG TTTAGTGAAT
CATGTTGTGC CAGAAGATCA ATTACTTGAA TTCTGTAAGA ACATGGCCAA ACGAATTGCA
TCCAAAGGTC AAATTGCTGT TCGCCTTTGC AAATCTGCCA TTGATCAAGG TCTAGAGATG
GATGTTGATA AGGGAATAGC ATATGAAGCC GAAGTATTTG GTCTTTGCTT TGCTACAACC
GATCAAACAG AAGGCATGAC TGCTTTTGTA GAAAAGAGAA AGCCTAACTT TACTGGCAAA
TAA
 
Protein sequence
MEWNTILLEK EGNIALLTIN RPKALNALNP EVLTELGQAV DAISADDEIF VVILKGAGEK 
AFVAGADITA MKDMTALEGR NFGQLGQEVF KKLEYMPKPI IAAINGFALG GGCELAMACD
IRVASEKSKF GQPEVGLGIT PGFAGTQRLP RLVGKGRAKE LIYTADIIGA ADAHRIGLVN
HVVPEDQLLE FCKNMAKRIA SKGQIAVRLC KSAIDQGLEM DVDKGIAYEA EVFGLCFATT
DQTEGMTAFV EKRKPNFTGK