Gene Dred_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1762 
Symbol 
ID4956365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1925164 
End bp1927167 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content40% 
IMG OID640180935 
Producttranslation elongation factor G 
Protein accessionYP_001113112 
Protein GI134299616 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.352706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAATT ACCAGTCCAA TCAACTCCGA AATGTTGCAG TGGTGGCCCA CGGCGGTTCT 
GGCAAGACGT CTCTAGTAGA AGCAATGATA TTTAATACCG GCACTCTTTC ACGGCTTGGG
AGAATAGAAG ACGGTACAAC TGTTTCAGAT TACCATCCTG AAGAAACTGC ACGAAAAATG
ACCATCCACA CAAGTCTGGT TCCGGTTGAA TGGAATAACA CGAAGATTAA CTTACTGGAT
ACACCGGGTT TTTCTGACTT TATTGGTGAA ATTAAAGGCT CTTTACGTGT TTCTGACGGC
GCTCTATTTG TGGTATCTGC AGTGGACGGT GTTCAGGTAC AACACGAAGT AATTTGGGAC
ATGACACCGG AATTACCAAA AATAGTAGTT ATTAATAAAA TGGATCGTGA AAATGCGAAC
TTTGATAAGA CTTTAGATGA ATTGAAGAAT AAATTTGGTG CTAACTTTGT ACCTATCCAA
CTCCCCATTG GGGCTTTCAA TGATTTCAAC GGAGTTGTTA ACGTTATAGA ACAAATGGCC
TTAGAAGGAG AAGGTAAGGG TAAAGAGACT GCTGTTGCCG GTGATTTAAC CGATCAACTG
GAACTATATC GTGAGGCCCT AATTGAAGCA GCTGCTGAGG GCGATGATGA CCTAACCATG
AAATATTTGG AAGGGGAAGA GCTTACAGTT GATGAAATAA GGGATGGTTT CCGTAAGTCT
CTGGCCATGG GTAAAGTGAT TCCTGTACTT GCCTGCAGTG CTACTAAAAA CATTGGAGTA
GCCTCATTAC TGGATTTTAT TTCTGTTTAC TTCCCTTCTC CTAAGGTGGA AGATGGTCCA
ATGGCTGCAT TAATATTTAA AACCATTGCA GATCCCTATG TGGGTAAGAT GAATTTCTTT
AAAGTATTTA GAGGACAATT TAAAAACGAT ACTCCAATCG TAAATGCCAG CAAAGAAAAA
GCTGAAAAAA TTAGTCAAAT TCTTTATGTA CGTGGTAAGT CTACAGTTCA AACCGATGTG
GTTCCCTGTG GTGACTTAGC TGTTCTAGTT AAGCTGCAAG ATACCTCCAC AGGTGATACT
TTATCTCATC GTGATAACCC ACAGGTATTA GAAGGTATAG AGTTCCCAAC TCCCACATTA
ACAATCGCTG TTGCTCCCAA GAGTAAGAAC GATGAAGATA AATTAGGTGA TGCTTTATTA
AAATTAGTAG ACGAAGATCC AACCGTTAAG ATTCATAAAA ATACTGAAAC TAAACAAACT
CTATTAATAA CCATGGGTGA AGCACAGACC CAGATTATGG TTGATCGTCT TAAGAAAAAA
TATGGTGTTG ATGTAACATT AGAAGAAGCA AAGGTGCCTT ATCGAGAAAC AGTACGTAAA
AAGGTTGAAG TAGAAGGAAA GCATAAAAAA CAATCTGGTG GTCGTGGTCA ATATGGTCAT
GTTTGGATCC GCTTTGAGCC TACTGACGAA CACTTTGTTT TTGGCGAAGA AGTATTTGGC
GGTGCCGTTC CCAGAAACTT TTTCCCAGCT GTTGAAAAAG GTTTAAAAGA AGCAATGGAA
GAAGGGGTAC TAGCAGGGTT CCCGATGACA GGACTGAAGG CTACATTATA TGATGGCTCA
TACCATCCAG TTGATTCCTC TGAAATGGCT TTCAAAATTG CAGCTCATTT AGCTTTTAAG
AAGGGTTGTG AACAAGCCAG TCCAGTTCTT TTAGAACCCA TTCAAAACGT TGAAGTTACT
GTTCCTGAAA GTTTCATGGG GGATATTATC AGTGATTTTA ATACCAAACG TGGCCGTGTG
TTAGGGACTG AGCCTATGGG TAAATTTGTT ATGATACGTG CTCAGGTTCC TCTGTCAGAA
ATGTATCGTT ACGCAATTGA TCTAAAATCA ATGACCCAGG GACGAGGTTC ATTTACTATG
GAGTTTGCCA GCTACGAAGA ATTCTCAGGC CGTGAAGCAG AATTGGTTAT TAAGAAGGCA
AAAGAAGAGC GTGAAGCTAA ATAA
 
Protein sequence
MKNYQSNQLR NVAVVAHGGS GKTSLVEAMI FNTGTLSRLG RIEDGTTVSD YHPEETARKM 
TIHTSLVPVE WNNTKINLLD TPGFSDFIGE IKGSLRVSDG ALFVVSAVDG VQVQHEVIWD
MTPELPKIVV INKMDRENAN FDKTLDELKN KFGANFVPIQ LPIGAFNDFN GVVNVIEQMA
LEGEGKGKET AVAGDLTDQL ELYREALIEA AAEGDDDLTM KYLEGEELTV DEIRDGFRKS
LAMGKVIPVL ACSATKNIGV ASLLDFISVY FPSPKVEDGP MAALIFKTIA DPYVGKMNFF
KVFRGQFKND TPIVNASKEK AEKISQILYV RGKSTVQTDV VPCGDLAVLV KLQDTSTGDT
LSHRDNPQVL EGIEFPTPTL TIAVAPKSKN DEDKLGDALL KLVDEDPTVK IHKNTETKQT
LLITMGEAQT QIMVDRLKKK YGVDVTLEEA KVPYRETVRK KVEVEGKHKK QSGGRGQYGH
VWIRFEPTDE HFVFGEEVFG GAVPRNFFPA VEKGLKEAME EGVLAGFPMT GLKATLYDGS
YHPVDSSEMA FKIAAHLAFK KGCEQASPVL LEPIQNVEVT VPESFMGDII SDFNTKRGRV
LGTEPMGKFV MIRAQVPLSE MYRYAIDLKS MTQGRGSFTM EFASYEEFSG REAELVIKKA
KEEREAK