Gene Dred_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1722 
Symbol 
ID4956352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1881712 
End bp1882614 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content42% 
IMG OID640180897 
Productinner-membrane translocator 
Protein accessionYP_001113074 
Protein GI134299578 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0174624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTA TTTTTAGCAT GTTTTTAAAT GATTACTATA TCCAGGTATT GACTATGCTG 
GGTATATATC TAATTGGTGC CCTAGGACTT AATTTAATAA CTGGTGTAAC TGGCCAACTA
TCCTTTGGAC ATGCAGCCTT TTTAAGTATT GGGGCCTATA CCTCAGCAAT CTTTAGTGTG
AAATTAGGAA TGTCCTTCCC TGTTGCTATC ATTGCTGGTG GTCTTATGTC TGGTTTTTGG
GGTATATTAC TGGGTTACCC TACCCTTCGG TTAACTGGTG ACTATTTAGG TATTGCCACC
TTAGGCTTTG GCGAAATTGT ACGAGTTGTT TTTCTTAACT TAAGTATCAC TGGCGGCGCC
CTGGGTATGG CAGGGATTCC CCGTAGCTCA AGTCTTACCG TGGTAATTTT AGTGGTTATT
GTGACTGTCT GGGCTATGGT TCGATTAGAA AATTCTCGCT TTGGCCGATC GTTGTTAGCA
ATTCGGGAAG ACGAAATTGC TGCCGAGGCC ATGGGCGTTA ACATTACCAC TTCAAAGATT
ACTGCCTTTG CCATAGGTAC CTTCATTGCC GGAGTTAGCG GAGGATTATA TGCCCACCTG
CTAACCTATC TAAATCCATC GGATTTCGGT TTTCTAAAAT CCTTTGAATT TTTAACCTTC
GTTGTTTTGG GTGGGTTGGG AAGCATTCCT GGCGTTATTC TGGGCACTAG TATTTTGACA
TTGGCACCTG AATTTCTACG TTTTATTGCT GACTATCGAA TGATGGTTTA TGGCTTACTG
ATGGTAGTAA TGATGATTGT TCGCCCCAGA GGATTGCTGG GTGGTGTAAA AGTAAGCCGG
ATCTTAAATA AGAAATCTCT CCCAAAAAAC AAAAACACAT CTGCCACCGG CGGGGTCAAC
TAA
 
Protein sequence
MDSIFSMFLN DYYIQVLTML GIYLIGALGL NLITGVTGQL SFGHAAFLSI GAYTSAIFSV 
KLGMSFPVAI IAGGLMSGFW GILLGYPTLR LTGDYLGIAT LGFGEIVRVV FLNLSITGGA
LGMAGIPRSS SLTVVILVVI VTVWAMVRLE NSRFGRSLLA IREDEIAAEA MGVNITTSKI
TAFAIGTFIA GVSGGLYAHL LTYLNPSDFG FLKSFEFLTF VVLGGLGSIP GVILGTSILT
LAPEFLRFIA DYRMMVYGLL MVVMMIVRPR GLLGGVKVSR ILNKKSLPKN KNTSATGGVN