Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1722 |
Symbol | |
ID | 4956352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1881712 |
End bp | 1882614 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640180897 |
Product | inner-membrane translocator |
Protein accession | YP_001113074 |
Protein GI | 134299578 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0174624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGTA TTTTTAGCAT GTTTTTAAAT GATTACTATA TCCAGGTATT GACTATGCTG GGTATATATC TAATTGGTGC CCTAGGACTT AATTTAATAA CTGGTGTAAC TGGCCAACTA TCCTTTGGAC ATGCAGCCTT TTTAAGTATT GGGGCCTATA CCTCAGCAAT CTTTAGTGTG AAATTAGGAA TGTCCTTCCC TGTTGCTATC ATTGCTGGTG GTCTTATGTC TGGTTTTTGG GGTATATTAC TGGGTTACCC TACCCTTCGG TTAACTGGTG ACTATTTAGG TATTGCCACC TTAGGCTTTG GCGAAATTGT ACGAGTTGTT TTTCTTAACT TAAGTATCAC TGGCGGCGCC CTGGGTATGG CAGGGATTCC CCGTAGCTCA AGTCTTACCG TGGTAATTTT AGTGGTTATT GTGACTGTCT GGGCTATGGT TCGATTAGAA AATTCTCGCT TTGGCCGATC GTTGTTAGCA ATTCGGGAAG ACGAAATTGC TGCCGAGGCC ATGGGCGTTA ACATTACCAC TTCAAAGATT ACTGCCTTTG CCATAGGTAC CTTCATTGCC GGAGTTAGCG GAGGATTATA TGCCCACCTG CTAACCTATC TAAATCCATC GGATTTCGGT TTTCTAAAAT CCTTTGAATT TTTAACCTTC GTTGTTTTGG GTGGGTTGGG AAGCATTCCT GGCGTTATTC TGGGCACTAG TATTTTGACA TTGGCACCTG AATTTCTACG TTTTATTGCT GACTATCGAA TGATGGTTTA TGGCTTACTG ATGGTAGTAA TGATGATTGT TCGCCCCAGA GGATTGCTGG GTGGTGTAAA AGTAAGCCGG ATCTTAAATA AGAAATCTCT CCCAAAAAAC AAAAACACAT CTGCCACCGG CGGGGTCAAC TAA
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Protein sequence | MDSIFSMFLN DYYIQVLTML GIYLIGALGL NLITGVTGQL SFGHAAFLSI GAYTSAIFSV KLGMSFPVAI IAGGLMSGFW GILLGYPTLR LTGDYLGIAT LGFGEIVRVV FLNLSITGGA LGMAGIPRSS SLTVVILVVI VTVWAMVRLE NSRFGRSLLA IREDEIAAEA MGVNITTSKI TAFAIGTFIA GVSGGLYAHL LTYLNPSDFG FLKSFEFLTF VVLGGLGSIP GVILGTSILT LAPEFLRFIA DYRMMVYGLL MVVMMIVRPR GLLGGVKVSR ILNKKSLPKN KNTSATGGVN
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