| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1720 |
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| Symbol | |
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| ID | 4955997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1879555 |
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| End bp | 1880745 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640180895 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001113072 |
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| Protein GI | 134299576 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.565956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ATAAGTTATG GAAGGTTATG TCTCTGATGT TAGTTCTTTC TTTTCTCTTG
GTCGGTTGCG GTGGAGAAGA GAAAAAGACC ACCGAAGGAG ATAAGGGATC TTCCAACGGC
GAAAGCATTA AAATTGGATT TTTAGGAGCA AAAAACGGTA ATCATGCTGC ATTTGGCATT
CCTACTTTGG AAGGTATGAA GATGGCAGCA GAGGATATTA ATAAAGCCGG CGGGTTACTG
GGCAAAAAGA TTGAAATTAT TGAAGAAGAC CATGGCAGCA AAAATACCGA AGGTGCTAAC
GTAACTCAAA AGCTTATTAC CCGTGATAAG GTTGTAGCCA TTGTAGGTGA TCCCACCACT
GCCATTACAA AAATTGCTGC ACCCATCGCA CAAGAGAAAA AGGTTGTATT GCTTTCTGCT
GGTGCTGTAG GAACCGGTGT TGTGGAAAAT GGTGACTACA TTTTCCGTGA TACACTACTG
GATGCCGTGG CGGCTCCTGC TGTTACCAAA TATGTAAAAG AAAATCTTGG TTGGAAAAAA
GTTGCTGTCA TCACTTCGAT GAATAATGAC TATAGTGTTG GACTATCAAA ATTATTCAGA
GCCGCTTTAG TTGATAATGG TATTGAAATT GTAGCAGAAC AAAGCATTCA AGACGGAGAT
CAGAACTTCA GTGCCCAGGT TACTGCCATT AAGGAGAAGA ATCCTGACGG AATTGTTTTT
ACAGGCTATT ACACTGAGGG TGGACTGTTT ATGAAAGAAG TTCGTAAACA AGGCATGAAG
ACTGTTATGG TTGGCGGCGA CGGTCTGTTG GGTGATGTTC TGATGAAGAT GGGTGGAGAA
GCTGTTGAGG GCAGCATGAT TTATTGCGGC TTTGCAGCCG ACGAGAACAA AGCAGGGGAG
AAAACAAAGA AGTTTATTGA AGCTTATAAA ACAGGAAATA ATGGTACGCT GCCTGATATG
TTTGCAGCCC AGGGCTACGA TGCTGTCATG CTTATTGCAG ATGCCATAAA AGCAGCTAAT
AGTGATGTAC CAGAAAAATT CCGTGCAGAA TTGGCCAAAA CGAAGGATTG GACAGGTGTG
TCGGGCATCA TTACATTCCA AGAAAACCGC GAACCTATCA AAAGTCCGGT TTACCTTTTG
GAAGTGAAAG GCGGAAAATT TACTGTAAAA GAAACAGTAG AAATAAAATA A
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| Protein sequence | MKKNKLWKVM SLMLVLSFLL VGCGGEEKKT TEGDKGSSNG ESIKIGFLGA KNGNHAAFGI
PTLEGMKMAA EDINKAGGLL GKKIEIIEED HGSKNTEGAN VTQKLITRDK VVAIVGDPTT
AITKIAAPIA QEKKVVLLSA GAVGTGVVEN GDYIFRDTLL DAVAAPAVTK YVKENLGWKK
VAVITSMNND YSVGLSKLFR AALVDNGIEI VAEQSIQDGD QNFSAQVTAI KEKNPDGIVF
TGYYTEGGLF MKEVRKQGMK TVMVGGDGLL GDVLMKMGGE AVEGSMIYCG FAADENKAGE
KTKKFIEAYK TGNNGTLPDM FAAQGYDAVM LIADAIKAAN SDVPEKFRAE LAKTKDWTGV
SGIITFQENR EPIKSPVYLL EVKGGKFTVK ETVEIK
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