Gene Dred_1704 details

Gene Information

• Locus tag: Dred_1704
• Symbol: def
• ID: 4955820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1863356
• End bp: 1863814
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640180879
• Product: peptide deformylase
• Protein accession: YP_001113056
• Protein GI: 134299560
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATAT ATAAAATTGT GGAAATCGGT GATGAAATCC TACGTGAGAA AGCAAAACCA 
GTAAAAGAGG TTACTCCAAA CATTCATAAA TTACTGGATA ATATGGCAGA TACCATGTAT 
GAGGCCAATG GGGTTGGCTT AGCTGCACCT CAAATTGGTG TTTCCAAACG GGTTATTGTT 
GTGGACATTG GTGAAGGTCT GATAGAATTG ATAAATCCTG AAATAGTAGA GGTGTCAGGA 
CATACCGTGA CAGACACCGA GGGTTGTCTT TCTGTTCCTA ATATGATTGG AGAAGTATCC 
AGAGCGGATA AGCTTGTAGT AAAAGGACTA AACCGTAAGG GTGAAGAAGT TTTGTATCGT 
GCCAAGGATT TTTTGGCCCG GGCATTTCAG CATGAAATTG ATCACCTAGA AGGAATTATC 
TTTGTGGATA AAGCCAGTAA TCTCCGAAAA GTTGAATAG 

 

Protein sequence

MAIYKIVEIG DEILREKAKP VKEVTPNIHK LLDNMADTMY EANGVGLAAP QIGVSKRVIV 
VDIGEGLIEL INPEIVEVSG HTVTDTEGCL SVPNMIGEVS RADKLVVKGL NRKGEEVLYR 
AKDFLARAFQ HEIDHLEGII FVDKASNLRK VE