| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1695 |
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| Symbol | |
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| ID | 4955498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1854416 |
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| End bp | 1855594 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640180870 |
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| Product | LL-diaminopimelate aminotransferase |
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| Protein accession | YP_001113047 |
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| Protein GI | 134299551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGCTTTA AAGAAGCGAG GAGAATTAAA AATTTACCAC CCTACCTTTT TGCTAGAATT
GAACAGGTGA TTGCTCAAAA AAAAGAAGAG GGTGTTGATG TCATTAGTCT AGGTATCGGT
GACCCTGATA TGCCCACGCC GGAACATATA ATTAAGGATG CAGAAAAGCA ACTGTATGTT
GCTGAAAACC ACCAATATCC ATCCTCGGTG GGAATGCTTT CCTATCGTAA ATCTGTGGCG
GATTTTTATG CAAGGCGTTT TGGGGTAGAG CTAGATCCTA AAACAGAAGT TGTTTCTTTG
ATTGGTTCCA AAGAAGGGAT TGCCCATATA TCCTGGTGTT ATTTAGATCC TGGTGATGTT
GTGCTGGTAC CAGATCCGGG TTATCCCGTT TACAGCGGTG GTGCCATTTT GGCCGGCGCT
GAACCTTATT ACATGCCCCT GACGGCGGAT AAGGGATTTT TGCCAGACCT CAACGCCATT
CCGGAGGATG TTGCCAGAAA GGCCAAAATG ATGTTTATCA ATTATCCAAA TAATCCTACC
GGTGCTGTTG CTGACGAGGC CTTTTACATA GAGGTAATCG CATTTGCCAG AAAATATGAA
ATCTTGGTTT GTCATGATAA TGCCTACTCG GAGGTTTCTT ACGAAGGTTA TAAGCCCCTT
TCCTTTCTAG AGATTCCCGG GGCCAAAGAA GTGGGCATAG AGTTTAGTTC TGTTTCCAAA
GCCTACAATA TGACTGGTTG GCGCATTGGG TGGGCTGTGG GTAACCCGGC GGTAATAGAG
GCTTTGGGCC GGTTTAAAAC CAATATTGAC TCAGGTCAGT TTCAGGCAAT TCAATACGCT
GCTATGGCTG GATTAAACGG CCCCCAGGAA ATTGTGGCGA CCAATAATGA AATATACCGT
GAGCGTAGGG ACATTGTTGT GGATGGGCTA AATGCCATGG GCTGGAGTCT AGAAAAACCC
AAAGCGACTT TTTACATTTG GGCGCCGGTT CCTAAAGGAT TTACTTCGGC CTCCTTTGCA
GAGTATGTTA TCGAAAGGGC CGGTGTAGTC ATAACACCTG GCAATGGTTA CGGGGAACAG
GGAGAAGGAT ATTTCCGTAT ATCCATTACA ATACCCAAGG AACGTATTGC TGAAGCGCTA
GAACGTATGA AAAATAATAT TGGCAAGGTT GAATTTTAA
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| Protein sequence | MRFKEARRIK NLPPYLFARI EQVIAQKKEE GVDVISLGIG DPDMPTPEHI IKDAEKQLYV
AENHQYPSSV GMLSYRKSVA DFYARRFGVE LDPKTEVVSL IGSKEGIAHI SWCYLDPGDV
VLVPDPGYPV YSGGAILAGA EPYYMPLTAD KGFLPDLNAI PEDVARKAKM MFINYPNNPT
GAVADEAFYI EVIAFARKYE ILVCHDNAYS EVSYEGYKPL SFLEIPGAKE VGIEFSSVSK
AYNMTGWRIG WAVGNPAVIE ALGRFKTNID SGQFQAIQYA AMAGLNGPQE IVATNNEIYR
ERRDIVVDGL NAMGWSLEKP KATFYIWAPV PKGFTSASFA EYVIERAGVV ITPGNGYGEQ
GEGYFRISIT IPKERIAEAL ERMKNNIGKV EF
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