| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1687 |
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| Symbol | |
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| ID | 4956555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1843219 |
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| End bp | 1843956 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640180862 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001113039 |
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| Protein GI | 134299543 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.660624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCATA AAGAGCAAAC GGCCAGAGAA AAATTAATAG TAGCTCTGGA TGTTGATACA
GCAGAAGAAG CAGTAACTCT AACCAAGAAA CTCACTCCCT ATGCGGCATT CTTTAAAGTG
GGTATGCAGT TATTCTATAG CCATGGGCCG GAGATCATTC GTATAATCAA GGATCAAGGG
GCAAAGGTGT TTTTGGACTT AAAGCTCCAC GATATTCCCA ATACCGTTGG ACAAGCAGCA
AGGGTCCTGG CAGGGCTGGG AGCGGACATC ATCAATGTCC ATGCTGCCGG AGGAGTGGAT
ATGATGCAGG CGGCTGCCAA TGCAGTTAGG CAAAGAGCTT ACTCCTTAGG AATCCCGGCC
CCCATGATAA TTTCAGTCAC TGTACTGACC AGCATTGACC AAAGGATCTT TGAGCAGGAG
TTGGGAATGC CTGGCACCAT TCAGGATAAA GTAAAAAAAT GGGCGGTTAT GACTCAGAAA
GCAGGCTTGG ACGGCGTAGT AGCATCGCCC CGGGAAATAC AAATCATACG GGAAGCTTGT
GGGACGGCTT TTAAAATTAT TACACCGGGC ATCCGGCCGT CCTGGTCCGT GAGCGGTGAC
CAAAAAAGAA TCATGACACC GGCTAAGGCA ATTCAACAGG GGACATCCTA CCTGGTTGTG
GGTAGGCCCA TTACTGGCGA CAAGGACCCG GCTGCGGCTG CCCAAAGAAT ATTGTCAGAA
ATAACAGAGG TACTTTAA
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| Protein sequence | MNHKEQTARE KLIVALDVDT AEEAVTLTKK LTPYAAFFKV GMQLFYSHGP EIIRIIKDQG
AKVFLDLKLH DIPNTVGQAA RVLAGLGADI INVHAAGGVD MMQAAANAVR QRAYSLGIPA
PMIISVTVLT SIDQRIFEQE LGMPGTIQDK VKKWAVMTQK AGLDGVVASP REIQIIREAC
GTAFKIITPG IRPSWSVSGD QKRIMTPAKA IQQGTSYLVV GRPITGDKDP AAAAQRILSE
ITEVL
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