Gene Dred_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1682 
Symbol 
ID4957126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1835746 
End bp1837029 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content48% 
IMG OID640180857 
Productdihydroorotase, multifunctional complex type 
Protein accessionYP_001113034 
Protein GI134299538 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00070754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTATC TAATTAAAGG TGGCATCGTG GTGGATCCGG TGGCAGATAC CTTAACCTGC 
ACAGATATTT TAGTGGAAGA GGGAATGATT AAAGAAATCG GCCAATTAAG TGATTCAGAG
GCAGAAGTGA TTGCTGCGGA GGGAAACTAT GTTTGTCCTG GCTTCATGGA TATGCACGTT
CATTTGCGGG AGCCAGGTTA CGAATATAAA GAAGACATCG TTAGTGGGAC TAGAGCTGCA
GCCATGGGAG GCTTCACTTC AGTGGCCTGT ATGCCAAATA CCAATCCTGT GGCAGACAAT
GCAGCTATTA TAAGCCATGT TTTAGCTAAA GCACGTAATG CGGCTGCCAG GGTTTTTCCC
ATTGGTGCTT TAACCAAGGG ATCCCTGGGC AAGGAACTAA CTGAGATGGC TGATTTAAAG
GGTGCCGGTG CGGTGGCTCT TTCTGATGAC GGCATGCCAG TGATGAATGC TGATATTATG
CTTAGGGTTA TGCAATACGC CTCTATGCTG GAAATGACAG TAATCTCCCA TTGTGAGGAT
AACAAACTGT CTGAGGGAGG CCAAATGCAC GAGGGTGCAG TTTCAGCAAT GTTGGGTCTG
AAAGGCATTC CATCACTGGC CGAGGAGATT ATGGTAGCTA GGGATATCCT GCTGTCGGAA
TACACAGGGT GTAGGCTTCA CTTGGCCCAT ATCAGTACCG AGGGCAGCGT AAGGTTGGTA
CGACAGGCCA AAGAAAGGGG AGTGCCGGTA ACGGCTGAAG CAACGCCCCA TCATTTTACT
CTGACCGAAG AGGCTGTCCA AGGGTATAGC ACAAATGCCA AGGTGAATCC CCCCTTACGC
AGACAAACAG ATGTAGAAGC AATTAAGGAA GGACTGCGTG ATGGTACCAT AGATGTGATC
GCCACAGACC ACGCGCCCCA TGCTTACCAC GAAAAGGATG TAGAATTTCA ATATGCCCCC
AATGGTATGA TCGGGTTGGA AACGGCAGTG GGCTTAATCT TTACTCAATT GGTTCAACCA
GGTATTCTGA CGGTTCCCCA GGCTGTGGCA AAACTCACCT GCAATCCCCA CAGAGTTTTA
GGTCTTTCGG GAGGACGCTT GCTGCCGGGA ACACCAGCTA ATATAACAAT CATTGACCCC
AAGCTAAGCG AAGTGGTTGA CCCAACAAAG CTACTCAGCA AGAGCAAGAA TACTCCCTTT
GGCCGCTGGA AATTAACAGG CCTGCCGGTA TTAACAATGA AAGATGGACT ATTAGTTATG
CGAGATAGAC AACTCCTAGA ATAA
 
Protein sequence
MRYLIKGGIV VDPVADTLTC TDILVEEGMI KEIGQLSDSE AEVIAAEGNY VCPGFMDMHV 
HLREPGYEYK EDIVSGTRAA AMGGFTSVAC MPNTNPVADN AAIISHVLAK ARNAAARVFP
IGALTKGSLG KELTEMADLK GAGAVALSDD GMPVMNADIM LRVMQYASML EMTVISHCED
NKLSEGGQMH EGAVSAMLGL KGIPSLAEEI MVARDILLSE YTGCRLHLAH ISTEGSVRLV
RQAKERGVPV TAEATPHHFT LTEEAVQGYS TNAKVNPPLR RQTDVEAIKE GLRDGTIDVI
ATDHAPHAYH EKDVEFQYAP NGMIGLETAV GLIFTQLVQP GILTVPQAVA KLTCNPHRVL
GLSGGRLLPG TPANITIIDP KLSEVVDPTK LLSKSKNTPF GRWKLTGLPV LTMKDGLLVM
RDRQLLE